RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 INSM2Q96T92 566 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-202ENST00000414700 COL25A1Q9BXS0 654 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-202ENST00000414700 TRIM55Q9BYV6 548 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 RDH14Q9HBH5 336 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 ZSCAN32Q9NX65 697 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 TAS2R1Q9NYW7 299 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 NUDT4Q9NZJ9 180 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 ADAMTS9Q9P2N4 1935 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 DCTN4Q9UJW0 460 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 ACSL5Q9ULC5 683 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 ASF1AQ9Y294 204 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 A0A1B0GVT2 93 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 PPP6CO00743 305 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 SERPINE1P05121 402 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 IDSP22304 550 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 EEF1DP29692 281 aaKnown RBP15.09■□□□□ 0.01
SHMT2-202ENST00000414700 ALDH18A1P54886 795 aaKnown RBP15.09■□□□□ 0.01
SHMT2-202ENST00000414700 CDH13P55290 713 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 NXPH1P58417 271 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 DNAJB13P59910 316 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 HERVK_113P63132 956 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 OVGP1Q12889 678 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 PRKG2Q13237 762 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 STX3Q13277 289 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 LRP8Q14114 963 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 LPAL2Q16609 132 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 FAM91A1Q658Y4 838 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 NET1Q7Z628 596 aaPredicted RBP15.09■□□□□ 0.01
SHMT2-202ENST00000414700 SLC22A9Q8IVM8 553 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 C12orf66Q96MD2 445 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 FOPNLQ96NB1 174 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 TMEM79Q9BSE2 394 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 LRRC61Q9BV99 259 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 ERVK-6Q9BXR3 956 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 SHCBP1LQ9BZQ2 653 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 NDE1Q9NXR1 346 aa15.09■□□□□ 0.01
SHMT2-202ENST00000414700 APOBEC3BQ9UH17 382 aaKnown RBP15.09■□□□□ 0.01
SHMT2-202ENST00000414700 KLF11O14901 512 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 VILLO15195 856 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 SNNO75324 88 aaPredicted RBP15.08■□□□□ 0
SHMT2-202ENST00000414700 SUPT7LO94864 414 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 CATP04040 527 aaKnown RBP15.08■□□□□ 0
SHMT2-202ENST00000414700 CSF2P04141 144 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 PIM1P11309 404 aaPredicted RBP15.08■□□□□ 0
SHMT2-202ENST00000414700 IMPDH1P20839 514 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 CYP2A7P20853 494 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 TPP2P29144 1249 aaPredicted RBP15.08■□□□□ 0
SHMT2-202ENST00000414700 SLC1A6P48664 564 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 HSPA7P48741 367 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 UAP1L1Q3KQV9 507 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 UNC50Q53HI1 259 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 CEP68Q76N32 757 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 DCP2Q8IU60 420 aaKnown RBP15.08■□□□□ 0
SHMT2-202ENST00000414700 LSMEM2Q8N112 164 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 MCOLN3Q8TDD5 553 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 GPBAR1Q8TDU6 330 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 CCDC126Q96EE4 140 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 SORT1Q99523 831 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 GSTO2Q9H4Y5 243 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 FSCN3Q9NQT6 498 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 IMP3Q9NV31 184 aaKnown RBP15.08■□□□□ 0
SHMT2-202ENST00000414700 PTBP2Q9UKA9 531 aaKnown RBP15.08■□□□□ 0
SHMT2-202ENST00000414700 PILRBQ9UKJ0 227 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 PLAGL1Q9UM63 463 aa15.08■□□□□ 0
SHMT2-202ENST00000414700 ARID1BQ8NFD5 2236 aaPredicted RBP15.07■□□□□ 0
SHMT2-202ENST00000414700 TRBV23OR9-2A0A075B6M9 112 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 A0A0G2JND7 137 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 A0A1B0GTL3 188 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 SMIM31A0A1B0GVY4 71 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 A6NCN8 305 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 SLC16A5O15375 505 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 SLC16A8O95907 504 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 ENO2P09104 434 aaPredicted RBP15.07■□□□□ 0
SHMT2-202ENST00000414700 HIST1H2AGP0C0S8 130 aaPredicted RBP15.07■□□□□ 0
SHMT2-202ENST00000414700 NME1P15531 152 aaKnown RBP15.07■□□□□ 0
SHMT2-202ENST00000414700 HIST1H2ADP20671 130 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 ARFIP2P53365 341 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 AP2B1P63010 937 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 BNC1Q01954 994 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 ILF3Q12906 894 aaKnown RBP eCLIP15.07■□□□□ 0
SHMT2-202ENST00000414700 GRB7Q14451 532 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 TRMT5Q32P41 509 aaKnown RBP15.07■□□□□ 0
SHMT2-202ENST00000414700 ZNF528Q3MIS6 628 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 C6orf163Q5TEZ5 329 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 SPATA24Q86W54 205 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 MYLK4Q86YV6 388 aaPredicted RBP15.07■□□□□ 0
SHMT2-202ENST00000414700 PATE1Q8WXA2 126 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 PIGKQ92643 395 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 PYCR2Q96C36 320 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 L3HYPDHQ96EM0 354 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 ZC3H10Q96K80 434 aaKnown RBP15.07■□□□□ 0
SHMT2-202ENST00000414700 HIST1H2AHQ96KK5 128 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 PKP4Q99569 1192 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 HIST1H2AJQ99878 128 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 H2AFJQ9BTM1 129 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 ATG10Q9H0Y0 220 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 PCM1Q15154 2024 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 IFRD1O00458 451 aaPredicted RBP15.07■□□□□ 0
SHMT2-202ENST00000414700 KCNJ13O60928 360 aa15.07■□□□□ 0
SHMT2-202ENST00000414700 SDC3O75056 442 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms