RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CDH26Q8IXH8 852 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 DSELQ8IZU8 1212 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 C1orf87Q8N0U7 546 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 ZCCHC7Q8N3Z6 543 aaKnown RBP4.7□□□□□ -1.66
LSM5-205ENST00000409952 RNF148Q8N7C7 305 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 TEX45Q8NA69 505 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 ZNF398Q8TD17 642 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 SLC20A1Q8WUM9 679 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 FAM46BQ96A09 425 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 REPS1Q96D71 796 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 RASL10BQ96S79 203 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 HAUS8Q9BT25 410 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 LMF2Q9BU23 707 aaKnown RBP4.7□□□□□ -1.66
LSM5-205ENST00000409952 ZNF416Q9BWM5 594 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 CUEDC2Q9H467 287 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 RMND5AQ9H871 391 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 OSER1Q9NX31 292 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 TXNDC16Q9P2K2 825 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 KCNJ14Q9UNX9 436 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 TMED5Q9Y3A6 229 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 NCAPD2Q15021 1401 aa4.7□□□□□ -1.66
LSM5-205ENST00000409952 A0A087X0K7 114 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 CTAGE15A4D2H0 777 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 EME2A4GXA9 379 aaPredicted RBP4.69□□□□□ -1.66
LSM5-205ENST00000409952 ANKDD1BA6NHY2 528 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 WNT9BO14905 357 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 NUDT21O43809 227 aaKnown RBP4.69□□□□□ -1.66
LSM5-205ENST00000409952 UGDHO60701 494 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 MTX2O75431 263 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 CTAGE8P0CG41 777 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 HKR1P10072 659 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 CORO1AP31146 461 aaKnown RBP4.69□□□□□ -1.66
LSM5-205ENST00000409952 AKT2P31751 481 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 AVPR1AP37288 418 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 MPLP40238 635 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 TNNT2P45379 298 aaPredicted RBP4.69□□□□□ -1.66
LSM5-205ENST00000409952 MTIF2P46199 727 aaKnown RBP4.69□□□□□ -1.66
LSM5-205ENST00000409952 PLCD1P51178 756 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 METAP1P53582 386 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 TAS2R38P59533 333 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 COG7P83436 770 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 HSF1Q00613 529 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 SPIBQ01892 262 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 ST3GAL1Q11201 340 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 FOXI1Q12951 378 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 LCP2Q13094 533 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 STIM1Q13586 685 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 NPTX1Q15818 432 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 PTGISQ16647 500 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 NADK2Q4G0N4 442 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 CFAP157Q5JU67 520 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 PRAMEF7Q5VXH5 474 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 KCTD18Q6PI47 426 aaPredicted RBP4.69□□□□□ -1.66
LSM5-205ENST00000409952 CES3Q6UWW8 571 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 RUFY3Q7L099 469 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 TMPRSS11BQ86T26 416 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 CTAGE6Q86UF2 777 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 CTAGE4Q8IX94 777 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 DNAJC10Q8IXB1 793 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 APCDD1Q8J025 514 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 RYBPQ8N488 228 aaPredicted RBP4.69□□□□□ -1.66
LSM5-205ENST00000409952 OR2T34Q8NGX1 318 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 P2RX5Q93086 422 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 ESAMQ96AP7 390 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 RHBDF1Q96CC6 855 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 C16orf58Q96GQ5 468 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 C17orf62Q9BQA9 187 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 PIGQQ9BRB3 760 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 KLHL31Q9H511 634 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 GPR173Q9NS66 373 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 PIGVQ9NUD9 493 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 SMPD3Q9NY59 655 aaPredicted RBP4.69□□□□□ -1.66
LSM5-205ENST00000409952 C11orf21Q9P2W6 132 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 TLK1Q9UKI8 766 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 C2CD2Q9Y426 696 aa4.69□□□□□ -1.66
LSM5-205ENST00000409952 NSD2O96028 1365 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 A0A0B4J203 849 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 KIR2DS5A0A0G2JLQ3 304 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 A0A0G2JPF8 293 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 PRSS51A0A1B0GVH4 220 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 A0A1W2PPK0 400 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 B4DGG1 531 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 HNRNPCL3B7ZW38 293 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 H0YC42 278 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 STMND1H3BQB6 276 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 KIR2DS3K7RE56 304 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 SLC28A1O00337 649 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 ANKRD28O15084 1053 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 MAGEB3O15480 346 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 GPRIN2O60269 458 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 ATP6V1G1O75348 118 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 ZNF821O75541 412 aaPredicted RBP4.68□□□□□ -1.66
LSM5-205ENST00000409952 ESRRBO95718 433 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 MOCS2O96007 188 aaPredicted RBP4.68□□□□□ -1.66
LSM5-205ENST00000409952 GSRP00390 522 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 HNRNPCL4P0DMR1 293 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 CALCBP10092 127 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 EPB41P11171 864 aaKnown RBP4.68□□□□□ -1.66
LSM5-205ENST00000409952 CYP2F1P24903 491 aa4.68□□□□□ -1.66
LSM5-205ENST00000409952 ELAVL4P26378 380 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms