RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 PPIL6Q8IXY8 311 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 TEX19Q8NA77 164 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 LINC01555Q8NAE3 123 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 ADAMTS17Q8TE56 1095 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 MS4A14Q96JA4 679 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 KLHL25Q9H0H3 589 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 ING2Q9H160 280 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 CCDC68Q9H2F9 335 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 MLXIPLQ9NP71 852 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 ZNF71Q9NQZ8 489 aaPredicted RBP13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 ACSS2Q9NR19 701 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 FAM114A2Q9NRY5 505 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 TXLNGQ9NUQ3 528 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 UTP6Q9NYH9 597 aaKnown RBP13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 EURLQ9NYK6 297 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 SPATA7Q9P0W8 599 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 SNX12Q9UMY4 172 aa13.99□□□□□ -0.17
NIF3L1-205ENST00000409588 SMAPO00193 183 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 PRICKLE3O43900 615 aaPredicted RBP13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 TTC4O95801 387 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 ONECUT2O95948 504 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 ALBP02768 609 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 MAGEA3P43357 314 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 VPS41P49754 854 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 CYP2A13Q16696 494 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 CTSL3PQ5NE16 218 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 PRAMEF17Q5VTA0 474 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 FIGLAQ6QHK4 219 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 ASB18Q6ZVZ8 466 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 PTRH1Q86Y79 214 aaKnown RBP13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 ZBTB2Q8N680 514 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 LKAAEAR1Q8TD35 194 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 KCNJ9Q92806 393 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 SLCO2A1Q92959 643 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 PTERQ96BW5 349 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 RUNDC3BQ96NL0 473 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 SERPINB12Q96P63 405 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 NRTNQ99748 197 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 SPRTNQ9H040 489 aaPredicted RBP13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 CRYL1Q9Y2S2 319 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 PCDHGA10Q9Y5H3 936 aa13.98□□□□□ -0.17
NIF3L1-205ENST00000409588 TENM4Q6N022 2769 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 CTAGE9A4FU28 777 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 EIF3FO00303 357 aaPredicted RBP13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 KLF7O75840 302 aaPredicted RBP13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 TMEM63AO94886 807 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 CATP04040 527 aaKnown RBP13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 CBSLP0DN79 551 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 ENO3P13929 434 aaPredicted RBP13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 MAGP20916 626 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 PEBP1P30086 187 aaKnown RBP13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 CBSP35520 551 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 SKIV2L2P42285 1042 aaKnown RBP13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 RELAQ04206 551 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 TLE1Q04724 770 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 GRM7Q14831 915 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 PPP1R7Q15435 360 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 LONRF1Q17RB8 773 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 LRRC8EQ6NSJ5 796 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 FAM198BQ6UWH4 519 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 CES3Q6UWW8 571 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 SYDE1Q6ZW31 735 aaPredicted RBP13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 CENPUQ71F23 418 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 TRIM73Q86UV7 250 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 SLC35F6Q8N357 371 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 NAT8LQ8N9F0 302 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 FBXO15Q8NCQ5 510 aaPredicted RBP13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 OR9A1PQ8NGU1 263 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 SIGLEC10Q96LC7 697 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 FER1L6-AS2Q96M78 137 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 GBP5Q96PP8 586 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 SLC25A23Q9BV35 468 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 IRAK4Q9NWZ3 460 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 IFT80Q9P2H3 777 aaPredicted RBP13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 ANKMY1Q9P2S6 941 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 NDOR1Q9UHB4 597 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 PCYOX1Q9UHG3 505 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 PLAGL1Q9UM63 463 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 FAM169AQ9Y6X4 670 aa13.97□□□□□ -0.17
NIF3L1-205ENST00000409588 SEC16AO15027 2179 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 ZCWPW2A0A1B0GU75 182 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 GOLGA8KD6RF30 607 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 GOLGA8TH3BQL2 631 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 PSIP1O75475 530 aaKnown RBP13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 CEACAM4O75871 244 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 VARSP26640 1264 aaKnown RBP13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 PGDP52209 483 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 RPS18P62269 152 aaKnown RBP13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 NFKB2Q00653 900 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 IL10RAQ13651 578 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 PTK6Q13882 451 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 PTCHD3Q3KNS1 767 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 NKAIN1Q4KMZ8 207 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 MLIPQ5VWP3 458 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 ANKRD22Q5VYY1 191 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 ZNF470Q6ECI4 717 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 LCN10Q6JVE6 187 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 UGT3A1Q6NUS8 523 aa13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 ZNF655Q8N720 491 aaPredicted RBP13.96□□□□□ -0.17
NIF3L1-205ENST00000409588 OR2Y1Q8NGV0 311 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms