RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 TMEM44Q2T9K0 475 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 MSS51Q4VC12 460 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 ANO7Q6IWH7 933 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 NEK10Q6ZWH5 1172 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 DNASE1L2Q92874 299 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 ZNF347Q96SE7 839 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 SMURF2Q9HAU4 748 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 SPATA7Q9P0W8 599 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 KLK3P07288 261 aaPredicted RBP16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 FEN1P39748 380 aaKnown RBP16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 MLLT3P42568 568 aaPredicted RBP16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 CRISP3P54108 245 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 LRRC73Q5JTD7 316 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 HTR3DQ70Z44 454 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 RBM4BQ9BQ04 359 aaKnown RBP16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 NDC1Q9BTX1 674 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 RBM4Q9BWF3 364 aaKnown RBP16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 ALG2Q9H553 416 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 A0A1W2PRB8 838 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 HSD3B1P14060 373 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 HSD3B2P26439 372 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 NRG3P56975 720 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 SLC13A2Q13183 592 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 BNIPLQ7Z465 357 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 OXR1Q8N573 874 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 TSPEARQ8WU66 669 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 CNPPD1Q9BV87 410 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 ATXN10Q9UBB4 475 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 NKX1-2Q9UD57 310 aaPredicted RBP16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 CYTH4Q9UIA0 394 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 SERTAD3Q9UJW9 196 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 OGDHLQ9ULD0 1010 aa16.4■□□□□ 0.22
PCDHA13-202ENST00000409494 CXorf49A8MYA2 514 aaPredicted RBP16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 GSSP48637 474 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 OLR1P78380 273 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 SLC5A11Q8WWX8 675 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 ZC4H2Q9NQZ6 224 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 MAT2BQ9NZL9 334 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 C19orf25Q9UFG5 118 aaPredicted RBP16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 LYVE1Q9Y5Y7 322 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 LDOC1O95751 146 aaPredicted RBP16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 NPPAP01160 153 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 PRKCGP05129 697 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 FABP3P05413 133 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 ALDH4A1P30038 563 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 GPR107Q5VW38 600 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 REP15Q6BDI9 236 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 NCEH1Q6PIU2 408 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 TMIGD1Q6UXZ0 262 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 CBARPQ8N350 705 aaPredicted RBP16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 SVOPLQ8N434 492 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 BPIFB6Q8NFQ5 453 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 MAPK15Q8TD08 544 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 C6orf62Q9GZU0 229 aaPredicted RBP16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 SERHL2Q9H4I8 314 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 SERHLQ9NQF3 203 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 MS4A12Q9NXJ0 267 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 STMN3Q9NZ72 180 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 EFCAB10A6NFE3 127 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 LAMTOR5O43504 91 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 PRG2P13727 222 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 CD247P20963 164 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 KCNA5P22460 613 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 ITGADQ13349 1161 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 MAPK11Q15759 364 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 TMEM135Q86UB9 458 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 COMMD2Q86X83 199 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 C12orf76Q8N812 135 aaPredicted RBP16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 SMYD1Q8NB12 490 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 ZCCHC10Q8TBK6 192 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 SETD7Q8WTS6 366 aaKnown RBP16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 TAPBPLQ9BX59 468 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 SMG9Q9H0W8 520 aaKnown RBP16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 TRIM39Q9HCM9 518 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 ZBTB42B2RXF5 422 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 B4DGG1 531 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 MATN2O00339 956 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 HNF1BP35680 557 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 PLA2G16P53816 162 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 TRAP1Q12931 704 aaKnown RBP16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 DGCR6Q14129 220 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 C6orf52Q5T4I8 152 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 MZT2AQ6P582 158 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 TRAF7Q6Q0C0 670 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 SLC36A4Q6YBV0 504 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 FGD2Q7Z6J4 655 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 MCEMP1Q8IX19 187 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 OR7A2PQ8NGA2 310 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 ZNF483Q8TF39 744 aaPredicted RBP16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 NAT14Q8WUY8 206 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 ZHX1-C8orf76Q96EF9 292 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 MRGPRX2Q96LB1 330 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 NEUROD4Q9HD90 331 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 LYARQ9NX58 379 aaKnown RBP16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 MKS1Q9NXB0 559 aa16.39■□□□□ 0.21
PCDHA13-202ENST00000409494 MEIS3P2A8K0S8 358 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 FADS2P1A8MWK0 482 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 G3V2T6 193 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 H7C0S8 307 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 AQP4P55087 323 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms