RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 TMEM98Q9Y2Y6 226 aa20.11■□□□□ 0.81
USP39-203ENST00000409470 IGLON5A6NGN9 336 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 NPC1O15118 1278 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 PCCBP05166 539 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 CCR3P51677 355 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 RPS14P62263 151 aaKnown RBP20.1■□□□□ 0.81
USP39-203ENST00000409470 PWP1Q13610 501 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 DOK6Q6PKX4 331 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 DLEU7Q6UYE1 221 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 ZNF547Q8IVP9 402 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 AADATQ8N5Z0 425 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 SLCO4A1Q96BD0 722 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 DUS3LQ96G46 650 aaKnown RBP20.1■□□□□ 0.81
USP39-203ENST00000409470 LINC00615Q96LM1 132 aaPredicted RBP20.1■□□□□ 0.81
USP39-203ENST00000409470 RSPH9Q9H1X1 276 aaPredicted RBP20.1■□□□□ 0.81
USP39-203ENST00000409470 AQP12BA6NM10 295 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 KCNH1O95259 989 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 IL6P05231 212 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 PRPH2P23942 346 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 MAPK1P28482 360 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 SEC13P55735 322 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 DOC2AQ14183 400 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 MAPKAPK3Q16644 382 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 SPANXN4Q5MJ08 99 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 LCN8Q6JVE9 175 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 AQP12AQ8IXF9 295 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 ADCY4Q8NFM4 1077 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 OR56A3Q8NH54 315 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 CLMPQ9H6B4 373 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 PRM3Q9NNZ6 103 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 CLEC1BQ9P126 229 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 DLGAP4Q9Y2H0 992 aa20.1■□□□□ 0.81
USP39-203ENST00000409470 C17orf113A0A1B0GUU1 675 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 ARPC2O15144 300 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 PGRP06401 933 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 PRPS2P11908 318 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 CD22P20273 847 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 GALK1P51570 392 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 PLOD1Q02809 727 aaPredicted RBP20.09■□□□□ 0.81
USP39-203ENST00000409470 ADAM15Q13444 863 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 BLMHQ13867 455 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 INPP5AQ14642 412 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 AGBL4Q5VU57 503 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 PNCKQ6P2M8 343 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 ADAMTSL4Q6UY14 1074 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 HEATR4Q86WZ0 1026 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 KLHDC8AQ8IYD2 350 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 SYTL1Q8IYJ3 562 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 HDDC3Q8N4P3 179 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 TMEM102Q8N9M5 508 aaPredicted RBP20.09■□□□□ 0.81
USP39-203ENST00000409470 OR2L2Q8NH16 312 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 HM13Q8TCT9 377 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 LRTOMTQ8WZ04 291 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 APIPQ96GX9 242 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 RIPOR3Q96MK2 946 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 OR4K3Q96R72 315 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 CGREF1Q99674 301 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 MUC13Q9H3R2 512 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 TMED5Q9Y3A6 229 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 PRKAB1Q9Y478 270 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 SNX13Q9Y5W8 968 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 REV3LO60673 3130 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 SERTM1A2A2V5 107 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 TIE1P35590 1138 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 SOX11P35716 441 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 TSTA3Q13630 321 aaPredicted RBP20.09■□□□□ 0.81
USP39-203ENST00000409470 NFE2L1Q14494 772 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 FAM9CQ8IZT9 166 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 RNF175Q8N4F7 328 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 FBXO15Q8NCQ5 510 aaPredicted RBP20.09■□□□□ 0.81
USP39-203ENST00000409470 CANT1Q8WVQ1 401 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 S1PR5Q9H228 398 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 PIF1Q9H611 641 aa20.09■□□□□ 0.81
USP39-203ENST00000409470 MGAT4DA6NG13 374 aa20.08■□□□□ 0.8
USP39-203ENST00000409470 ADH1BP00325 375 aa20.08■□□□□ 0.8
USP39-203ENST00000409470 C5AR1P21730 350 aa20.08■□□□□ 0.8
USP39-203ENST00000409470 HNF4AP41235 474 aa20.08■□□□□ 0.8
USP39-203ENST00000409470 TAS2R38P59533 333 aa20.08■□□□□ 0.8
USP39-203ENST00000409470 CAMK2GQ13555 558 aaPredicted RBP20.08■□□□□ 0.8
USP39-203ENST00000409470 ENPP2Q13822 863 aa20.08■□□□□ 0.8
USP39-203ENST00000409470 DDX39BQ13838 428 aaKnown RBP20.08■□□□□ 0.8
USP39-203ENST00000409470 GRHL2Q6ISB3 625 aa20.08■□□□□ 0.8
USP39-203ENST00000409470 ZNF480Q8WV37 535 aa20.08■□□□□ 0.8
USP39-203ENST00000409470 PPWD1Q96BP3 646 aaKnown RBP20.08■□□□□ 0.8
USP39-203ENST00000409470 COX14Q96I36 57 aa20.08■□□□□ 0.8
USP39-203ENST00000409470 APOLD1Q96LR9 279 aa20.08■□□□□ 0.8
USP39-203ENST00000409470 TSSK3Q96PN8 268 aa20.08■□□□□ 0.8
USP39-203ENST00000409470 OR52E6Q96RD3 313 aa20.08■□□□□ 0.8
USP39-203ENST00000409470 SEMA6AQ9H2E6 1030 aa20.08■□□□□ 0.8
USP39-203ENST00000409470 AURKCQ9UQB9 309 aa20.08■□□□□ 0.8
USP39-203ENST00000409470 KCNE2Q9Y6J6 123 aa20.08■□□□□ 0.8
USP39-203ENST00000409470 A0A1W2PP55 124 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 DHRS12A0PJE2 317 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 AP1G1O43747 822 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 UQCRBP14927 111 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 CLDN8P56748 225 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 MTPNP58546 118 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 MRPS35P82673 323 aaKnown RBP20.07■□□□□ 0.8
USP39-203ENST00000409470 ZNF33BQ06732 778 aa20.07■□□□□ 0.8
USP39-203ENST00000409470 DLX2Q07687 328 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms