RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 FAM25EA8MYX2 175 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 PTGES3LE9PB15 166 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 STX16-NPEPL1H3BU86 382 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 STX16O14662 325 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 CD3EAPO15446 510 aaKnown RBP7.14□□□□□ -1.27
SCN9A-202ENST00000409435 PSMG1O95456 288 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 FUT11Q495W5 492 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 FAM76BQ5HYJ3 339 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 FAM111AQ96PZ2 611 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 ZNF670Q9BS34 389 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 SLC35C2Q9NQQ7 365 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 GRIP1Q9Y3R0 1128 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 C5orf51A6NDU8 294 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 POP7O75817 140 aaKnown RBP7.14□□□□□ -1.27
SCN9A-202ENST00000409435 FHP07954 510 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 DBTP11182 482 aaKnown RBP7.14□□□□□ -1.27
SCN9A-202ENST00000409435 SERPINB5P36952 375 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 SLC6A11P48066 632 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 MAPKAPK3Q16644 382 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.14□□□□□ -1.278e-7■■■□□ 18.5
SCN9A-202ENST00000409435 SLC26A9Q7LBE3 791 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 TMPRSS11BQ86T26 416 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 C12orf40Q86WS4 652 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 RBM12BQ8IXT5 1001 aaKnown RBP7.14□□□□□ -1.27
SCN9A-202ENST00000409435 OR4K2Q8NGD2 314 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 GTPBP3Q969Y2 492 aaKnown RBP7.14□□□□□ -1.27
SCN9A-202ENST00000409435 KCTD14Q9BQ13 255 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-202ENST00000409435 LGR4Q9BXB1 951 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 SLC46A2Q9BY10 475 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 MAGEE1Q9HCI5 957 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 NGBQ9NPG2 151 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 HPF1Q9NWY4 346 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 FAM240BA0A1B0GVZ2 78 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 OR6C74A6NCV1 312 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 SLCO1B7G3V0H7 640 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 M0QX08 132 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 PIRO00625 290 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 GALR2O43603 387 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-202ENST00000409435 SLC28A2O43868 658 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 CPN2P22792 545 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 HOXC13P31276 330 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 RPL22P35268 128 aaKnown RBP7.14□□□□□ -1.27
SCN9A-202ENST00000409435 NUBP1P53384 320 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 CASP9P55211 416 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 RAB5BP61020 215 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 RNF44Q7L0R7 432 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 BEND5Q7L4P6 421 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 R3HCC1LQ7Z5L2 792 aaKnown RBP7.14□□□□□ -1.27
SCN9A-202ENST00000409435 OSTM1Q86WC4 334 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 CAMK1DQ8IU85 385 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 SFRP1Q8N474 314 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 TTLQ8NG68 377 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 TEX47Q8TBZ9 253 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 SLC9A6Q92581 669 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 RADILQ96JH8 1075 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 YIPF4Q9BSR8 244 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 RNF38Q9H0F5 515 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 SMOC2Q9H3U7 446 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 NID2Q14112 1375 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-202ENST00000409435 FAM172BPA6NC97 362 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 PRKD3O94806 890 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 ADRA1DP25100 572 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 CRABP2P29373 138 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 MAPK12P53778 367 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 CYP4F3Q08477 520 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 TTC23Q5W5X9 447 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 NEPROQ6NW34 567 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 HAGHLQ6PII5 290 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-202ENST00000409435 NCCRP1Q6ZVX7 275 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-202ENST00000409435 CRYBG2Q8N1P7 616 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 KYQ8NBH2 561 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 SLC4A11Q8NBS3 891 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 KIAA0895Q8NCT3 520 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 SLC35C1Q96A29 364 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 MMABQ96EY8 250 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-202ENST00000409435 WDR24Q96S15 920 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 PTGES2Q9H7Z7 377 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 GLOD4Q9HC38 313 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 ZNF225Q9UK10 706 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 SIK3Q9Y2K2 1263 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 PCDHA3Q9Y5H8 950 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 KIAA0100Q14667 2235 aaKnown RBP7.14□□□□□ -1.27
SCN9A-202ENST00000409435 AGPSO00116 658 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 ARHGAP33O14559 1287 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 PRMT5O14744 637 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-202ENST00000409435 PPEF2O14830 753 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 SLC7A4O43246 635 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 MGRN1O60291 552 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 B3GALNT1O75752 331 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 HLA-DQA2P01906 255 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 LBPP18428 481 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 PGAM1P18669 254 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 CLCN2P51788 898 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 OR4D2P58180 307 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 DGCR6Q14129 220 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 LACTB2Q53H82 288 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-202ENST00000409435 HYIQ5T013 277 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 C19orf48Q6RUI8 117 aa7.14□□□□□ -1.27
SCN9A-202ENST00000409435 C3orf62Q6ZUJ4 267 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms