RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 CAPN12Q6ZSI9 719 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 TIPARPQ7Z3E1 657 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 AMZ2Q86W34 360 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 TRIM48Q8IWZ4 208 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 KLHDC8BQ8IXV7 354 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 UNC5BQ8IZJ1 945 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 ENDOVQ8N8Q3 282 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 CCDC197Q8NCU1 140 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 SLC35B2Q8TB61 432 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 EXTL1Q92935 676 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 CAVIN3Q969G5 261 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 NKD1Q969G9 470 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 RTP4Q96DX8 246 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 DNAJC1Q96KC8 554 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 NAPGQ99747 312 aaPredicted RBP9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 UNKQ9C0B0 810 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 SERHL2Q9H4I8 314 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 STN1Q9H668 368 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 ASB8Q9H765 288 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 SMOXQ9NWM0 555 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 SIDT1Q9NXL6 827 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 AKAP7Q9P0M2 348 aaPredicted RBP9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 PCDHGA3Q9Y5H0 932 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 MN1Q10571 1320 aaPredicted RBP9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 ZNF106Q9H2Y7 1883 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 OR5K4A6NMS3 321 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 B4E171 279 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 SNPHO15079 494 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 PABPC4LP0CB38 370 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 SLC2A4P14672 509 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 LIFP15018 202 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 CTRB1P17538 263 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 IDSP22304 550 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 TSPAN7P41732 249 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 CAPZBP47756 277 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 RHDQ02161 417 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 TRAP1Q12931 704 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 MRPL28Q13084 256 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 LAPTM5Q13571 262 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 LINC00303Q3SY05 128 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 CEP78Q5JTW2 689 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 METTL21CQ5VZV1 264 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 CTRB2Q6GPI1 263 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 CERS6Q6ZMG9 384 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 FAM92BQ6ZTR7 304 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 PATL1Q86TB9 770 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 UBL4BQ8N7F7 174 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 EXD3Q8N9H8 876 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 SVIPQ8NHG7 77 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 DTX3LQ8TDB6 740 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 BRSK1Q8TDC3 778 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 SH3KBP1Q96B97 665 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 CXorf40BQ96DE9 158 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 EGLN2Q96KS0 407 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 C9orf72Q96LT7 481 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 TTC25Q96NG3 672 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 RAB3IPQ96QF0 476 aaPredicted RBP9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 TTC1Q99614 292 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 DDA1Q9BW61 102 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 SPRY4Q9C004 299 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 CCDC177Q9NQR7 707 aaPredicted RBP9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 PILRAQ9UKJ1 303 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 AAR2Q9Y312 384 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 UTP20O75691 2785 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 hCG_2014768A0A024R1R8 64 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 MIF4GDA9UHW6 222 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 FBP2O00757 339 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 C9P02748 559 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 ETS1P14921 441 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 ZNF28P17035 718 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 MSH3P20585 1137 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 PTDSS1P48651 473 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 MC2RQ01718 297 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 GUCY1A3Q02108 690 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 PRPSAP1Q14558 356 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 POU6F1Q14863 301 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 DCAF12Q5T6F0 453 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 TMEM164Q5U3C3 297 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 ZDHHC20Q5W0Z9 365 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 METRNLQ641Q3 311 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 WASH2PQ6VEQ5 465 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 TBC1D1Q86TI0 1168 aaPredicted RBP9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 PIANPQ8IYJ0 282 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 ZBED8Q8IZ13 594 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 SYCE1Q8N0S2 351 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 GLIS1Q8NBF1 620 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 C1orf54Q8WWF1 131 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 CFAP36Q96G28 342 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 ELMO2Q96JJ3 720 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 INSM2Q96T92 566 aaPredicted RBP9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 DPYSL5Q9BPU6 564 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 WWP1Q9H0M0 922 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 UCK1Q9HA47 277 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 RNPEPL1Q9HAU8 725 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 ARNT2Q9HBZ2 717 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 WASH6PQ9NQA3 447 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 POT1Q9NUX5 634 aa9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 IMP3Q9NV31 184 aaKnown RBP9.42□□□□□ -0.9
NIF3L1-202ENST00000409020 GUCA1BQ9UMX6 200 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms