RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 HNRNPRO43390 633 aaKnown RBP12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 RGS14O43566 566 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 KATNA1O75449 491 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 ZNF821O75541 412 aaPredicted RBP12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 SLC22A3O75751 556 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 TSPAN12O95859 305 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 LYNP07948 512 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 ENO2P09104 434 aaPredicted RBP12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 OR56A5P0C7T3 313 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 LINC00032P0C843 101 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 CYP2A6P11509 494 aaPredicted RBP12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 FCGR1AP12314 374 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 CTPS1P17812 591 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 TSPAN8P19075 237 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 PEX2P28328 305 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 CDKN1CP49918 316 aaPredicted RBP12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 CAMK2GQ13555 558 aaPredicted RBP12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 ADRM1Q16186 407 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 MYLK3Q32MK0 819 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 CARD16Q5EG05 197 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 XKR7Q5GH72 579 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 LPCAT4Q643R3 524 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 RPS27LQ71UM5 84 aaKnown RBP12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 CAMK1DQ8IU85 385 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 PHYKPLQ8IUZ5 450 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 KBTBD2Q8IY47 623 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 ZBTB2Q8N680 514 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 EFCAB3Q8N7B9 438 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 OR2T34Q8NGX1 318 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 OR2T3Q8NH03 318 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 METTL6Q8TCB7 284 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 SCRN2Q96FV2 425 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 DCUN1D1Q96GG9 259 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 C3orf30Q96M34 536 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 PLEKHG4BQ96PX9 1271 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 ZBTB18Q99592 522 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 GPATCH1Q9BRR8 931 aaKnown RBP12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 TM6SF2Q9BZW4 377 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 MIR1-1HGQ9H1L0 117 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 SUV39H2Q9H5I1 410 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 TNFRSF12AQ9NP84 129 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 ZDHHC3Q9NYG2 299 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 ABCD2Q9UBJ2 740 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 PCOLCE2Q9UKZ9 415 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 GPR45Q9Y5Y3 372 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 NAV2Q8IVL1 2488 aa12.59□□□□□ -0.39
SMARCB1-203ENST00000407082 IGHV1OR15-9A0A0B4J2B8 117 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 ATP6AP2A0A1C7CYW4 349 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 TCRBV3S1A0A5B6 114 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 CCDC154A6NI56 674 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 QSOX1O00391 747 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 E2F3O00716 465 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 TXNDC9O14530 226 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 FFAR2O15552 330 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 AP1G1O43747 822 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 OR1I1O60431 355 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 RNASEH1O60930 286 aaKnown RBP12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 EEDO75530 441 aaKnown RBP12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 ATP6AP2O75787 350 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 SLC25A14O95258 325 aaPredicted RBP12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 ALDOCP09972 364 aaKnown RBP12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 PRSS56P0CW18 603 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 PLA2G2AP14555 144 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 HOXB6P17509 224 aaKnown RBP12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 HNF1BP35680 557 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 ARL1P40616 181 aaPredicted RBP12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 EEFSECP57772 596 aaKnown RBP12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 CDKL1Q00532 357 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 MS4A2Q01362 244 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 FOLH1Q04609 750 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 EMX2Q04743 252 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 PRKG2Q13237 762 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 GTF2H2Q13888 395 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 ELAVL3Q14576 367 aaKnown RBP12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 SFT2D3Q587I9 215 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 GTF2H2CQ6P1K8 395 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 FAM151BQ6UXP7 276 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 DPY19L3Q6ZPD9 716 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 TMPRSS7Q7RTY8 843 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 MILR1Q7Z6M3 343 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 SYVN1Q86TM6 617 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 FUNDC1Q8IVP5 155 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 MARVELD2Q8N4S9 558 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 PACRGLQ8N7B6 248 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 TNIP2Q8NFZ5 429 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 OR2A12Q8NGT7 310 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 DNAJB8Q8NHS0 232 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 RHBDD1Q8TEB9 315 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 UBTD2Q8WUN7 234 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 OR8D1Q8WZ84 308 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 LRRC58Q96CX6 371 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 NSUN5Q96P11 429 aaKnown RBP12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 FAM129BQ96TA1 746 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 EGFL8Q99944 293 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 COPS7BQ9H9Q2 264 aaPredicted RBP12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 FBRSQ9HAH7 460 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 IL21RQ9HBE5 538 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 ARMC1Q9NVT9 282 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 PKD2L2Q9NZM6 624 aa12.58□□□□□ -0.4
SMARCB1-203ENST00000407082 OPTCQ9UBM4 332 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms