RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 ZNF778Q96MU6 729 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 IL17FQ96PD4 163 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 LACRTQ9GZZ8 138 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 WDR54Q9H977 334 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 SLC2A6Q9UGQ3 507 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 CIDEBQ9UHD4 219 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 R3HDM2Q9Y2K5 976 aaKnown RBP11.54□□□□□ -0.56
TFF3-202ENST00000398431 EPN1Q9Y6I3 576 aaPredicted RBP11.54□□□□□ -0.56
TFF3-202ENST00000398431 LRBAP50851 2863 aa11.54□□□□□ -0.56
TFF3-202ENST00000398431 A0A1B0GX78 115 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 TCRBV7S2A1N4TA0A589 114 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 IQCF5A8MTL0 148 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 DSCR3O14972 297 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 PSMD3O43242 534 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 LRRTM2O43300 516 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 GOT2P00505 430 aaKnown RBP11.53□□□□□ -0.56
TFF3-202ENST00000398431 OR56A5P0C7T3 313 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 GRIA1P42261 906 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 TSFMP43897 325 aaKnown RBP11.53□□□□□ -0.56
TFF3-202ENST00000398431 OR1D4P47884 311 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 ACVR1Q04771 509 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 KLF1Q13351 362 aaPredicted RBP11.53□□□□□ -0.56
TFF3-202ENST00000398431 AGAP7PQ5VUJ5 663 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 SHISA6Q6ZSJ9 500 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 TAB3Q8N5C8 712 aaPredicted RBP11.53□□□□□ -0.56
TFF3-202ENST00000398431 CATSPER1Q8NEC5 780 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 OR11G2Q8NGC1 345 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 FAR1Q8WVX9 515 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 DLG3Q92796 817 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 AGAP4Q96P64 663 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 TMEM121Q9BTD3 319 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 CARD6Q9BX69 1037 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 KCNF1Q9H3M0 494 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 LUC7LQ9NQ29 371 aaKnown RBP11.53□□□□□ -0.56
TFF3-202ENST00000398431 AGPAT4Q9NRZ5 378 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 CUTCQ9NTM9 273 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 IRAK4Q9NWZ3 460 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 CDC23Q9UJX2 597 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 OSGIN2Q9Y236 505 aa11.53□□□□□ -0.56
TFF3-202ENST00000398431 GRID2IPA4D2P6 1211 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 FITM1A5D6W6 292 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 BTNL10A8MVZ5 291 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 CTSVO60911 334 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 SLCO2B1O94956 709 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 EDN3P14138 238 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 PRF1P14222 555 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 CCZ1BP86790 482 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 CCZ1P86791 482 aaPredicted RBP11.52□□□□□ -0.57
TFF3-202ENST00000398431 HSPA14Q0VDF9 509 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 ZRSR2Q15696 482 aaKnown RBP11.52□□□□□ -0.57
TFF3-202ENST00000398431 TSTD2Q5T7W7 516 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 YOD1Q5VVQ6 348 aaPredicted RBP11.52□□□□□ -0.57
TFF3-202ENST00000398431 MYO7BQ6PIF6 2116 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 LRRC8AQ8IWT6 810 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 SRRM1Q8IYB3 904 aaKnown RBP11.52□□□□□ -0.57
TFF3-202ENST00000398431 OR2L8Q8NGY9 312 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 LRRC45Q96CN5 670 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 ALS2CR12Q96Q35 445 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 LMF1Q96S06 567 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 LHPPQ9H008 270 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 SOX17Q9H6I2 414 aaPredicted RBP11.52□□□□□ -0.57
TFF3-202ENST00000398431 CTSFQ9UBX1 484 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 RIMKLBQ9ULI2 386 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 PYCARDQ9ULZ3 195 aa11.52□□□□□ -0.57
TFF3-202ENST00000398431 SOWAHDA6NJG2 315 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 TARM1B6A8C7 271 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 KDM1AO60341 852 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 NRP2O60462 931 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 ZNF189O75820 626 aaPredicted RBP11.51□□□□□ -0.57
TFF3-202ENST00000398431 S1PR4O95977 384 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 PIM1P11309 404 aaPredicted RBP11.51□□□□□ -0.57
TFF3-202ENST00000398431 AOAHP28039 575 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 TNFRSF8P28908 595 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 CYLC1P35663 651 aaPredicted RBP11.51□□□□□ -0.57
TFF3-202ENST00000398431 CDC16Q13042 620 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 GRM7Q14831 915 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 ZNF169Q14929 603 aaPredicted RBP11.51□□□□□ -0.57
TFF3-202ENST00000398431 SF1Q15637 639 aaKnown RBP11.51□□□□□ -0.57
TFF3-202ENST00000398431 P3H1Q32P28 736 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 CCSMST1Q4G0I0 132 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 SYTL3Q4VX76 610 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 ZC3H12BQ5HYM0 836 aaKnown RBP11.51□□□□□ -0.57
TFF3-202ENST00000398431 WASHC2DQ5SRD0 308 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 ATG9BQ674R7 924 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 B3GNTL1Q67FW5 361 aaPredicted RBP11.51□□□□□ -0.57
TFF3-202ENST00000398431 ZNF324BQ6AW86 544 aaPredicted RBP11.51□□□□□ -0.57
TFF3-202ENST00000398431 SP5Q6BEB4 398 aaPredicted RBP11.51□□□□□ -0.57
TFF3-202ENST00000398431 RPUSD3Q6P087 351 aaKnown RBP11.51□□□□□ -0.57
TFF3-202ENST00000398431 RAD9BQ6WBX8 426 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 LINC00523Q86TU6 105 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 LDB1Q86U70 411 aaPredicted RBP11.51□□□□□ -0.57
TFF3-202ENST00000398431 TAX1BP1Q86VP1 789 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 SLC34A3Q8N130 599 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 KRT222Q8N1A0 295 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 METTL27Q8N6F8 245 aaPredicted RBP11.51□□□□□ -0.57
TFF3-202ENST00000398431 AMER2Q8N7J2 671 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 OR4L1Q8NH43 312 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 CFAP61Q8NHU2 1237 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 DENND1AQ8TEH3 1009 aa11.51□□□□□ -0.57
TFF3-202ENST00000398431 PSMF1Q92530 271 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms