RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 CCDC57Q2TAC2 916 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 EIF2S3LQ2VIR3 472 aaKnown RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 KRTAP19-4Q3LI73 84 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 CFAP221Q4G0U5 840 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 TMEM41BQ5BJD5 291 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 AARS2Q5JTZ9 985 aaKnown RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 ENTPD8Q5MY95 495 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 Q5PR19 223 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 C1orf185Q5T7R7 199 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 PLEKHA7Q6IQ23 1121 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 TCTN3Q6NUS6 607 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 ANKRD54Q6NXT1 300 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 MIS18BP1Q6P0N0 1132 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 PRSS55Q6UWB4 352 aaPredicted RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 SLC29A4Q7RTT9 530 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 ERASQ7Z444 233 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 ARHGAP22Q7Z5H3 698 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 IRF2BP2Q7Z5L9 587 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 AMIGO1Q86WK6 493 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 MEX3DQ86XN8 651 aaKnown RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 NRROSQ86YC3 692 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 C1QL4Q86Z23 238 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 SFTPA2Q8IWL1 248 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 PHC2Q8IXK0 858 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 MB21D2Q8IYB1 491 aaPredicted RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 ADGRF4Q8IZF3 695 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 DSELQ8IZU8 1212 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 APCDD1Q8J025 514 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 TTC5Q8N0Z6 440 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 LGI4Q8N135 537 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 LCORLQ8N3X6 602 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 RYBPQ8N488 228 aaPredicted RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 RNF148Q8N7C7 305 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 FADS6Q8N9I5 356 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 PAPD5Q8NDF8 572 aaKnown RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 FAM71CQ8NEG0 241 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 CSNK2A3Q8NEV1 391 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 OR52K1Q8NGK4 314 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 VANGL1Q8TAA9 524 aaPredicted RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 ZNF671Q8TAW3 534 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 ZNF398Q8TD17 642 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 RAPGEF5Q92565 580 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 PROX1Q92786 737 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 SLCO4A1Q96BD0 722 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 MTERF3Q96E29 417 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 TEPSINQ96N21 525 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 ZNF582Q96NG8 517 aaPredicted RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 PSKH2Q96QS6 385 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 TAAR6Q96RI8 345 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 MYADMQ96S97 322 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 COQ7Q99807 217 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 AIFM2Q9BRQ8 373 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 THAP7Q9BT49 309 aaPredicted RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 LMF2Q9BU23 707 aaKnown RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 POLR3CQ9BUI4 534 aaPredicted RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 FICDQ9BVA6 458 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 TRMT61BQ9BVS5 477 aaKnown RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 GATA5Q9BWX5 397 aaPredicted RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 GON7Q9BXV9 100 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 KRTAP9-3Q9BYQ3 159 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 PRRG4Q9BZD6 226 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 NPFFR1Q9GZQ6 430 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 EGLN1Q9GZT9 426 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 FAM192AQ9GZU8 254 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 TSPYL1Q9H0U9 437 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 SIRPDQ9H106 197 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 MEGF9Q9H1U4 602 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 FOXP1Q9H334 677 aaPredicted RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 SEBOXQ9HB31 216 aaPredicted RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 HHATLQ9HCP6 504 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 DNAJC4Q9NNZ3 241 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 MKKSQ9NPJ1 570 aaPredicted RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 HOMER3Q9NSC5 361 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 OSER1Q9NX31 292 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 RAB20Q9NX57 234 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 GAR1Q9NY12 217 aaKnown RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 DONSONQ9NYP3 566 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 CNOT2Q9NZN8 540 aaKnown RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 KLHL8Q9P2G9 620 aaPredicted RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 RHCGQ9UBD6 479 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 COPS7AQ9UBW8 275 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 RUVBL2Q9Y230 463 aaKnown RBP2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 SH3GLB1Q9Y371 365 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 KCTD3Q9Y597 815 aa2.03□□□□□ -2.08
HMGN2P39-201ENST00000398005 ZNF536O15090 1300 aa2.02□□□□□ -2.09
HMGN2P39-201ENST00000398005 ABCC4O15439 1325 aa2.02□□□□□ -2.09
HMGN2P39-201ENST00000398005 KIF16BQ96L93 1317 aa2.02□□□□□ -2.09
HMGN2P39-201ENST00000398005 A0A087X0K7 114 aa2.02□□□□□ -2.09
HMGN2P39-201ENST00000398005 TRBV5-7A0A0A0MS05 114 aa2.02□□□□□ -2.09
HMGN2P39-201ENST00000398005 A0A0U1RRA0 63 aa2.02□□□□□ -2.09
HMGN2P39-201ENST00000398005 FEZF1A0PJY2 475 aa2.02□□□□□ -2.09
HMGN2P39-201ENST00000398005 SLC22A23A1A5C7 686 aa2.02□□□□□ -2.09
HMGN2P39-201ENST00000398005 GOLGA8OA6NCC3 632 aa2.02□□□□□ -2.09
HMGN2P39-201ENST00000398005 NPEPPSL1A6NEC2 478 aa2.02□□□□□ -2.09
HMGN2P39-201ENST00000398005 TMEM221A6NGB7 291 aa2.02□□□□□ -2.09
HMGN2P39-201ENST00000398005 SLC15A5A6NIM6 579 aa2.02□□□□□ -2.09
HMGN2P39-201ENST00000398005 ANKRD30BLA7E2S9 258 aa2.02□□□□□ -2.09
HMGN2P39-201ENST00000398005 A8MUI8 341 aa2.02□□□□□ -2.09
HMGN2P39-201ENST00000398005 B4DGG1 531 aa2.02□□□□□ -2.09
HMGN2P39-201ENST00000398005 BTBD19C9JJ37 291 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms