RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 RNASEH2BQ5TBB1 312 aaKnown RBP2.71□□□□□ -1.98
TRAV40-201ENST00000390467 DHRS7BQ6IAN0 325 aaPredicted RBP2.71□□□□□ -1.98
TRAV40-201ENST00000390467 KIF6Q6ZMV9 814 aa2.71□□□□□ -1.98
TRAV40-201ENST00000390467 OR13C3Q8NGS6 347 aa2.71□□□□□ -1.98
TRAV40-201ENST00000390467 OR6S1Q8NH40 331 aa2.71□□□□□ -1.98
TRAV40-201ENST00000390467 APOBEC4Q8WW27 367 aaKnown RBP2.71□□□□□ -1.98
TRAV40-201ENST00000390467 RASL10AQ92737 203 aa2.71□□□□□ -1.98
TRAV40-201ENST00000390467 DHX58Q96C10 678 aa2.71□□□□□ -1.98
TRAV40-201ENST00000390467 CCDC34Q96HJ3 373 aa2.71□□□□□ -1.98
TRAV40-201ENST00000390467 MPP4Q96JB8 637 aa2.71□□□□□ -1.98
TRAV40-201ENST00000390467 FAM20AQ96MK3 541 aa2.71□□□□□ -1.98
TRAV40-201ENST00000390467 TEX10Q9NXF1 929 aaPredicted RBP2.71□□□□□ -1.98
TRAV40-201ENST00000390467 PTRH2Q9Y3E5 179 aaKnown RBP2.71□□□□□ -1.98
TRAV40-201ENST00000390467 NME7Q9Y5B8 376 aa2.71□□□□□ -1.98
TRAV40-201ENST00000390467 HCFC1P51610 2035 aa2.71□□□□□ -1.98
TRAV40-201ENST00000390467 ZNF644Q9H582 1327 aaPredicted RBP2.7□□□□□ -1.98
TRAV40-201ENST00000390467 LOC102723996A0A087X1L8 192 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 A0A1W2PQ09 198 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 C2orf81A6NN90 581 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 GJB3O75712 270 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 CDK2AP2O75956 126 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 VTNP04004 478 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 SMIM18P0DKX4 95 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 HAPLN1P10915 354 aaPredicted RBP2.7□□□□□ -1.98
TRAV40-201ENST00000390467 SLC2A2P11168 524 aaPredicted RBP2.7□□□□□ -1.98
TRAV40-201ENST00000390467 PGFP49763 221 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 HNRNPKP61978 463 aaKnown RBP eCLIP2.7□□□□□ -1.98
TRAV40-201ENST00000390467 PSMC6P62333 389 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 DUSP28Q4G0W2 176 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 PDLIM3Q53GG5 364 aaPredicted RBP2.7□□□□□ -1.98
TRAV40-201ENST00000390467 HSP90AB4PQ58FF6 505 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 SYT14P1Q58G82 188 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 KRT79Q5XKE5 535 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 SZRD1Q7Z422 152 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 SLC47A2Q86VL8 602 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 TMEM173Q86WV6 379 aaPredicted RBP2.7□□□□□ -1.98
TRAV40-201ENST00000390467 HPS6Q86YV9 775 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 ZNF595Q8IYB9 648 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 MAPK15Q8TD08 544 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 PTPMT1Q8WUK0 201 aaPredicted RBP2.7□□□□□ -1.98
TRAV40-201ENST00000390467 SSMEM1Q8WWF3 244 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 PIGBQ92521 554 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 FAM120BQ96EK7 910 aaKnown RBP2.7□□□□□ -1.98
TRAV40-201ENST00000390467 KIFC3Q9BVG8 833 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 KRTAP4-3Q9BYR4 195 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 TMED3Q9Y3Q3 217 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 LAS1LQ9Y4W2 734 aaKnown RBP2.7□□□□□ -1.98
TRAV40-201ENST00000390467 TRIM17Q9Y577 477 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 CSNK1G3Q9Y6M4 447 aa2.7□□□□□ -1.98
TRAV40-201ENST00000390467 A8MU10 97 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 FPGTO14772 594 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 BCL2L11O43521 198 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 DOK2O60496 412 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 TRUB2O95900 331 aaKnown RBP2.69□□□□□ -1.98
TRAV40-201ENST00000390467 IGHEP01854 428 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 DNASE1P24855 282 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 PTGER3P43115 390 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 NRIP1P48552 1158 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 CDH13P55290 713 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 TMEM50BP56557 158 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 EXT1Q16394 746 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 ZNF74Q16587 644 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 UGT3A2Q3SY77 523 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 IGSF11Q5DX21 431 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 SLC25A30Q5SVS4 291 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 UGT3A1Q6NUS8 523 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 Q6ZR54 194 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 C1orf122Q6ZSJ8 110 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 MMD2Q8IY49 270 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 POM121L12Q8N7R1 296 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 C1orf131Q8NDD1 294 aaKnown RBP2.69□□□□□ -1.98
TRAV40-201ENST00000390467 SPDL1Q96EA4 605 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 ZNF414Q96IQ9 312 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 FAM218AQ96MZ4 157 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 MS4A10Q96PG2 267 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 CHCHD6Q9BRQ6 235 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 MAK16Q9BXY0 300 aaKnown RBP2.69□□□□□ -1.98
TRAV40-201ENST00000390467 MYH16Q9H6N6 1097 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 MED20Q9H944 212 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 PANK3Q9H999 370 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 GNB4Q9HAV0 340 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 PPANQ9NQ55 473 aaKnown RBP2.69□□□□□ -1.98
TRAV40-201ENST00000390467 MAN1B1Q9UKM7 699 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 RARRES3Q9UL19 164 aa2.69□□□□□ -1.98
TRAV40-201ENST00000390467 ZNF215Q9UL58 517 aaPredicted RBP2.69□□□□□ -1.98
TRAV40-201ENST00000390467 EPHB6O15197 1021 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 EIF5BO60841 1220 aaKnown RBP2.68□□□□□ -1.98
TRAV40-201ENST00000390467 BAIAP3O94812 1187 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 GJA1P17302 382 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 CAPN3P20807 821 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 MPZP25189 248 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 SLC9A3P48764 834 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 XGP55808 180 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 MC1RQ01726 317 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 CREB5Q02930 508 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 DDX10Q13206 875 aaKnown RBP2.68□□□□□ -1.98
TRAV40-201ENST00000390467 PEX6Q13608 980 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 EFTUD2Q15029 972 aaKnown RBP eCLIP2.68□□□□□ -1.98
TRAV40-201ENST00000390467 SLC35D3Q5M8T2 416 aa2.68□□□□□ -1.98
TRAV40-201ENST00000390467 LCN1P1Q5VSP4 162 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms