RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 SMPDL3AQ92484 453 aa23.81■■□□□ 1.4
ECHDC3-201ENST00000379215 CAMK1GQ96NX5 476 aa23.81■■□□□ 1.4
ECHDC3-201ENST00000379215 CDK15Q96Q40 435 aa23.81■■□□□ 1.4
ECHDC3-201ENST00000379215 KCNA7Q96RP8 456 aa23.81■■□□□ 1.4
ECHDC3-201ENST00000379215 KIR3DX1Q9H7L2 352 aa23.81■■□□□ 1.4
ECHDC3-201ENST00000379215 GOLGA8QA0A0J9YX86 632 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 GOLGA8OA6NCC3 632 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 A6NCN8 305 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 GOLGA8NF8WBI6 632 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 KRT6AP02538 564 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 KRT6BP04259 564 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 JUNP05412 331 aaKnown RBP23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 EPHA3P29320 983 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 KRT6CP48668 564 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 C21orf59P57076 290 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 NXPH1P58417 271 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 LYSMD4Q5XG99 296 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 FAM91A1Q658Y4 838 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 DUS1LQ6P1R4 473 aaKnown RBP23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 NRROSQ86YC3 692 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 LRRC56Q8IYG6 542 aaPredicted RBP23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 DTWD2Q8NBA8 298 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 ZFPM2Q8WW38 1151 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 CXorf40BQ96DE9 158 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 MYLK2Q9H1R3 596 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 RIC8BQ9NVN3 520 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 CIDEBQ9UHD4 219 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 ANKRD12Q6UB98 2062 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 LRP4O75096 1905 aa23.8■■□□□ 1.4
ECHDC3-201ENST00000379215 OR52A4PA6NMU1 304 aa23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 FCHO1O14526 889 aa23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 PIP5K1BO14986 540 aa23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 HNF4AP41235 474 aa23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 IRF8Q02556 426 aa23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 ZNF33BQ06732 778 aa23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 ELOCQ15369 112 aa23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 LSM12Q3MHD2 195 aaKnown RBP23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 NXNQ6DKJ4 435 aa23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 LCTLQ6UWM7 567 aa23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 TAF8Q7Z7C8 310 aa23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 CLNKQ7Z7G1 428 aa23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 SDR16C5Q8N3Y7 309 aa23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 PPFIBP2Q8ND30 876 aa23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 CCL4L1Q8NHW4 92 aa23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 WDR55Q9H6Y2 383 aaPredicted RBP23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 TAAR2Q9P1P5 351 aa23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 SUSD2Q9UGT4 822 aa23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 SNX6Q9UNH7 406 aa23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 TIMM22Q9Y584 194 aa23.79■■□□□ 1.4
ECHDC3-201ENST00000379215 TECTAO75443 2155 aa23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 KIR2DS5A0A0G2JLQ3 304 aa23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 A0A0G2JNG1 304 aa23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 KIR2DS3K7RE56 304 aa23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 GNSP15586 552 aa23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 IRX1P78414 480 aaPredicted RBP23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 CHIT1Q13231 466 aa23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 KIR2DS5Q14953 304 aa23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 PRAMEF14Q5SWL7 426 aa23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 PRAMEF13Q5VWM6 474 aa23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 PMS2CLQ68D20 193 aa23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 MYLK4Q86YV6 388 aaPredicted RBP23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 DCBLD1Q8N8Z6 715 aa23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 AVL9Q8NBF6 648 aa23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 PPP1R36Q96LQ0 422 aa23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 OR52B2Q96RD2 323 aa23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 MENTQ9BUN1 341 aa23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 NMUR2Q9GZQ4 415 aa23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 EHD1Q9H4M9 534 aa23.78■■□□□ 1.4
ECHDC3-201ENST00000379215 JUPP14923 745 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 PKLRP30613 574 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 CNR2P34972 360 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 CASP2P42575 452 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 C10orf62Q5T681 223 aaPredicted RBP23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 THEMIS2Q5TEJ8 643 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 ARMCX6Q7L4S7 300 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 MAML2Q8IZL2 1156 aaPredicted RBP23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 TMEM105Q8N8V8 129 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 OR2L8Q8NGY9 312 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 OR4K3Q96R72 315 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 TUBB6Q9BUF5 446 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 POT1Q9NUX5 634 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 SCHIP1Q9P0W5 487 aaPredicted RBP23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 SPASTQ9UBP0 616 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 KLF15Q9UIH9 416 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 PLAGL1Q9UM63 463 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 RNF11Q9Y3C5 154 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 E9PBE3 544 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 KLHL41O60662 606 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 ULK1O75385 1050 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 WFS1O76024 890 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 SHMT2P34897 504 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 HNRNPKP61978 463 aaKnown RBP eCLIP23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 TSTA3Q13630 321 aaPredicted RBP23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 PRRT3Q5FWE3 981 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 XKR7Q5GH72 579 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 XKR6Q5GH73 641 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 IYDQ6PHW0 289 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 BMP8AQ7Z5Y6 402 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 GKN2Q86XP6 184 aa23.77■■□□□ 1.4
ECHDC3-201ENST00000379215 TRIM48Q8IWZ4 208 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms