RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 SYF2O95926 243 aaKnown RBP21.29■■□□□ 1
SRM-201ENST00000376957 PRKAR1AP10644 381 aa21.29■■□□□ 1
SRM-201ENST00000376957 WT1P19544 449 aaPredicted RBP21.29■■□□□ 1
SRM-201ENST00000376957 MAGP20916 626 aa21.29■■□□□ 1
SRM-201ENST00000376957 CMPK1P30085 196 aa21.29■■□□□ 1
SRM-201ENST00000376957 RPA3P35244 121 aaPredicted RBP21.29■■□□□ 1
SRM-201ENST00000376957 CYP4F2P78329 520 aa21.29■■□□□ 1
SRM-201ENST00000376957 C2orf54Q08AI8 447 aa21.29■■□□□ 1
SRM-201ENST00000376957 CUL1Q13616 776 aa21.29■■□□□ 1
SRM-201ENST00000376957 CYP2A13Q16696 494 aa21.29■■□□□ 1
SRM-201ENST00000376957 ZNF549Q6P9A3 640 aa21.29■■□□□ 1
SRM-201ENST00000376957 ANKMY2Q8IV38 441 aa21.29■■□□□ 1
SRM-201ENST00000376957 ZBED8Q8IZ13 594 aa21.29■■□□□ 1
SRM-201ENST00000376957 MYO1HQ8N1T3 1032 aa21.29■■□□□ 1
SRM-201ENST00000376957 LMNTD1Q8N9Z9 388 aa21.29■■□□□ 1
SRM-201ENST00000376957 FBXO15Q8NCQ5 510 aaPredicted RBP21.29■■□□□ 1
SRM-201ENST00000376957 FBXO36Q8NEA4 188 aa21.29■■□□□ 1
SRM-201ENST00000376957 FLVCR1-AS1Q8TAF5 88 aa21.29■■□□□ 1
SRM-201ENST00000376957 CD200R1Q8TD46 325 aa21.29■■□□□ 1
SRM-201ENST00000376957 MCOLN3Q8TDD5 553 aa21.29■■□□□ 1
SRM-201ENST00000376957 CT55Q8WUE5 264 aa21.29■■□□□ 1
SRM-201ENST00000376957 DLG3Q92796 817 aa21.29■■□□□ 1
SRM-201ENST00000376957 RNF31Q96EP0 1072 aa21.29■■□□□ 1
SRM-201ENST00000376957 C16orf45Q96MC5 204 aaPredicted RBP21.29■■□□□ 1
SRM-201ENST00000376957 BBC3Q96PG8 261 aaPredicted RBP21.29■■□□□ 1
SRM-201ENST00000376957 NDC1Q9BTX1 674 aa21.29■■□□□ 1
SRM-201ENST00000376957 DPH5Q9H2P9 285 aa21.29■■□□□ 1
SRM-201ENST00000376957 GALPQ9UBC7 116 aa21.29■■□□□ 1
SRM-201ENST00000376957 IL17BQ9UHF5 180 aa21.29■■□□□ 1
SRM-201ENST00000376957 C9J4A7 227 aa21.28■■□□□ 1
SRM-201ENST00000376957 MYO1CO00159 1063 aa21.28■■□□□ 1
SRM-201ENST00000376957 EIF3HO15372 352 aaKnown RBP eCLIP21.28■■□□□ 1
SRM-201ENST00000376957 NKX2-8O15522 239 aa21.28■■□□□ 1
SRM-201ENST00000376957 ZSCAN9O15535 394 aaPredicted RBP21.28■■□□□ 1
SRM-201ENST00000376957 ZNF749O43361 778 aa21.28■■□□□ 1
SRM-201ENST00000376957 CREG1O75629 220 aa21.28■■□□□ 1
SRM-201ENST00000376957 CCNDBP1O95273 360 aa21.28■■□□□ 1
SRM-201ENST00000376957 AHSGP02765 367 aa21.28■■□□□ 1
SRM-201ENST00000376957 PTPN4P29074 926 aa21.28■■□□□ 1
SRM-201ENST00000376957 MGAT5Q09328 741 aa21.28■■□□□ 1
SRM-201ENST00000376957 PDAP1Q13442 181 aaKnown RBP21.28■■□□□ 1
SRM-201ENST00000376957 TBR1Q16650 682 aa21.28■■□□□ 1
SRM-201ENST00000376957 TCTE1Q5JU00 501 aa21.28■■□□□ 1
SRM-201ENST00000376957 TEDDM1Q5T9Z0 273 aa21.28■■□□□ 1
SRM-201ENST00000376957 STEAP4Q687X5 459 aa21.28■■□□□ 1
SRM-201ENST00000376957 FIGLAQ6QHK4 219 aa21.28■■□□□ 1
SRM-201ENST00000376957 IGDCC3Q8IVU1 814 aa21.28■■□□□ 1
SRM-201ENST00000376957 CPNE9Q8IYJ1 553 aa21.28■■□□□ 1
SRM-201ENST00000376957 DSELQ8IZU8 1212 aa21.28■■□□□ 1
SRM-201ENST00000376957 ASB11Q8WXH4 323 aa21.28■■□□□ 1
SRM-201ENST00000376957 CDKL2Q92772 493 aa21.28■■□□□ 1
SRM-201ENST00000376957 TRIM44Q96DX7 344 aaPredicted RBP21.28■■□□□ 1
SRM-201ENST00000376957 FAM60AQ9NP50 221 aa21.28■■□□□ 1
SRM-201ENST00000376957 TXNDC16Q9P2K2 825 aa21.28■■□□□ 1
SRM-201ENST00000376957 FARSAQ9Y285 508 aaKnown RBP21.28■■□□□ 1
SRM-201ENST00000376957 PADI2Q9Y2J8 665 aa21.28■■□□□ 1
SRM-201ENST00000376957 ZFYVE26Q68DK2 2539 aa21.28■■□□□ 1
SRM-201ENST00000376957 ARHGEF33A8MVX0 844 aa21.27■■□□□ 1
SRM-201ENST00000376957 E7ESA3 106 aa21.27■■□□□ 1
SRM-201ENST00000376957 KIF2AO00139 706 aaPredicted RBP21.27■■□□□ 1
SRM-201ENST00000376957 RAD51CO43502 376 aa21.27■■□□□ 1
SRM-201ENST00000376957 URI1O94763 535 aaPredicted RBP21.27■■□□□ 1
SRM-201ENST00000376957 C8GP07360 202 aa21.27■■□□□ 1
SRM-201ENST00000376957 HIST1H2AGP0C0S8 130 aaPredicted RBP21.27■■□□□ 1
SRM-201ENST00000376957 HIST1H2ADP20671 130 aa21.27■■□□□ 1
SRM-201ENST00000376957 MCM3P25205 808 aa21.27■■□□□ 1
SRM-201ENST00000376957 PEBP1P30086 187 aaKnown RBP21.27■■□□□ 1
SRM-201ENST00000376957 ARSFP54793 590 aa21.27■■□□□ 1
SRM-201ENST00000376957 IL2P60568 153 aa21.27■■□□□ 1
SRM-201ENST00000376957 GPS2Q13227 327 aa21.27■■□□□ 1
SRM-201ENST00000376957 TSTA3Q13630 321 aaPredicted RBP21.27■■□□□ 1
SRM-201ENST00000376957 FAM45BPQ6NSW5 357 aa21.27■■□□□ 1
SRM-201ENST00000376957 UBE2R2Q712K3 238 aaPredicted RBP21.27■■□□□ 1
SRM-201ENST00000376957 SYVN1Q86TM6 617 aa21.27■■□□□ 1
SRM-201ENST00000376957 SYTL1Q8IYJ3 562 aa21.27■■□□□ 1
SRM-201ENST00000376957 DNAJC22Q8N4W6 341 aa21.27■■□□□ 1
SRM-201ENST00000376957 GPATCH11Q8N954 259 aa21.27■■□□□ 1
SRM-201ENST00000376957 FAM45AQ8TCE6 357 aa21.27■■□□□ 1
SRM-201ENST00000376957 PROKR1Q8TCW9 393 aa21.27■■□□□ 1
SRM-201ENST00000376957 APOBEC4Q8WW27 367 aaKnown RBP21.27■■□□□ 1
SRM-201ENST00000376957 HIST1H2AHQ96KK5 128 aa21.27■■□□□ 1
SRM-201ENST00000376957 PWWP2AQ96N64 755 aa21.27■■□□□ 1
SRM-201ENST00000376957 NDNQ99608 321 aa21.27■■□□□ 1
SRM-201ENST00000376957 HIST1H2AJQ99878 128 aa21.27■■□□□ 1
SRM-201ENST00000376957 H2AFJQ9BTM1 129 aa21.27■■□□□ 1
SRM-201ENST00000376957 TRIM54Q9BYV2 358 aa21.27■■□□□ 1
SRM-201ENST00000376957 ADNPQ9H2P0 1102 aa21.27■■□□□ 1
SRM-201ENST00000376957 EURLQ9NYK6 297 aa21.27■■□□□ 1
SRM-201ENST00000376957 GPN3Q9UHW5 284 aaPredicted RBP21.27■■□□□ 1
SRM-201ENST00000376957 CDC23Q9UJX2 597 aa21.27■■□□□ 1
SRM-201ENST00000376957 RAB40ALP0C0E4 278 aa21.26■□□□□ 0.99
SRM-201ENST00000376957 PNLIPRP1P54315 467 aa21.26■□□□□ 0.99
SRM-201ENST00000376957 SP140Q13342 867 aa21.26■□□□□ 0.99
SRM-201ENST00000376957 ERV3-1Q14264 604 aa21.26■□□□□ 0.99
SRM-201ENST00000376957 ZIC1Q15915 447 aa21.26■□□□□ 0.99
SRM-201ENST00000376957 CCSMST1Q4G0I0 132 aa21.26■□□□□ 0.99
SRM-201ENST00000376957 YOD1Q5VVQ6 348 aaPredicted RBP21.26■□□□□ 0.99
SRM-201ENST00000376957 FAM199XQ6PEV8 388 aaPredicted RBP21.26■□□□□ 0.99
SRM-201ENST00000376957 ZNF572Q7Z3I7 529 aaPredicted RBP21.26■□□□□ 0.99
SRM-201ENST00000376957 SLC26A11Q86WA9 606 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms