RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 MIPP30301 263 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 NSFP46459 744 aaKnown RBP11.64□□□□□ -0.55
HDAC8-204ENST00000373560 HCAR3P49019 387 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 KRTAP1-1Q07627 177 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 PRKG2Q13237 762 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 TUBA3CQ13748 450 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 BECN1Q14457 450 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 KRT33BQ14525 404 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 PCBP2Q15366 365 aaKnown RBP eCLIP11.64□□□□□ -0.55
HDAC8-204ENST00000373560 CLEC16AQ2KHT3 1053 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 EMC4Q5J8M3 183 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 GPRC6AQ5T6X5 926 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 SPINK14Q6IE38 97 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 TUBA3EQ6PEY2 450 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 ARSKQ6UWY0 536 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 NLRP9Q7RTR0 991 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 GALNTL5Q7Z4T8 443 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 AMIGO1Q86WK6 493 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 RBM41Q96IZ5 413 aaKnown RBP11.64□□□□□ -0.55
HDAC8-204ENST00000373560 TTC25Q96NG3 672 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 CSPG4P5Q96PW8 444 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 FERD3LQ96RJ6 166 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 NEUROD4Q9HD90 331 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 CUTCQ9NTM9 273 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 EURLQ9NYK6 297 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 STOX2Q9P2F5 926 aaPredicted RBP11.64□□□□□ -0.55
HDAC8-204ENST00000373560 NXT1Q9UKK6 140 aaKnown RBP11.64□□□□□ -0.55
HDAC8-204ENST00000373560 PLCL2Q9UPR0 1127 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 MEGF8Q7Z7M0 2845 aa11.64□□□□□ -0.55
HDAC8-204ENST00000373560 A0A1W2PPR1 153 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 A0A1W2PQ72 361 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 MGAT4DA6NG13 374 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 EIF3CLB5ME19 914 aaKnown RBP11.63□□□□□ -0.55
HDAC8-204ENST00000373560 LILRA1O75019 489 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 CALB1P05937 261 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 ZGLP1P0C6A0 271 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 UCHL3P15374 230 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 RAB28P51157 221 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 PMPCAQ10713 525 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 FASTKQ14296 549 aaKnown RBP11.63□□□□□ -0.55
HDAC8-204ENST00000373560 NOMO1Q15155 1222 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 SYCP1Q15431 976 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 MICALCLQ6ZW33 695 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 POLNQ7Z5Q5 900 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 ZNF677Q86XU0 584 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 LMNTD1Q8N9Z9 388 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 DDHD1Q8NEL9 900 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 OR2L2Q8NH16 312 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 EIF3CQ99613 913 aaKnown RBP11.63□□□□□ -0.55
HDAC8-204ENST00000373560 GPR63Q9BZJ6 419 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 PLEKHF2Q9H8W4 249 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 IL26Q9NPH9 171 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 FANCLQ9NW38 375 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 COLEC10Q9Y6Z7 277 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 SCN2AQ99250 2005 aa11.63□□□□□ -0.55
HDAC8-204ENST00000373560 A0A0J9YY10 115 aa11.62□□□□□ -0.55
HDAC8-204ENST00000373560 H3BRJ5 948 aa11.62□□□□□ -0.55
HDAC8-204ENST00000373560 SIX3O95343 332 aaPredicted RBP11.62□□□□□ -0.55
HDAC8-204ENST00000373560 TPBGLP0DKB5 382 aa11.62□□□□□ -0.55
HDAC8-204ENST00000373560 CA4P22748 312 aa11.62□□□□□ -0.55
HDAC8-204ENST00000373560 EEF1DP29692 281 aaKnown RBP11.62□□□□□ -0.55
HDAC8-204ENST00000373560 PTGS2P35354 604 aa11.62□□□□□ -0.55
HDAC8-204ENST00000373560 CD96P40200 585 aa11.62□□□□□ -0.55
HDAC8-204ENST00000373560 RFC3P40938 356 aa11.62□□□□□ -0.55
HDAC8-204ENST00000373560 KIR2DL3P43628 341 aa11.62□□□□□ -0.55
HDAC8-204ENST00000373560 CARSP49589 748 aaKnown RBP11.62□□□□□ -0.55
HDAC8-204ENST00000373560 OR1C1Q15619 314 aa11.62□□□□□ -0.55
HDAC8-204ENST00000373560 SHEQ5VZ18 495 aa11.62□□□□□ -0.55
HDAC8-204ENST00000373560 FAM151BQ6UXP7 276 aa11.62□□□□□ -0.55
HDAC8-204ENST00000373560 NT5DC3Q86UY8 548 aa11.62□□□□□ -0.55
HDAC8-204ENST00000373560 DLG3Q92796 817 aa11.62□□□□□ -0.55
HDAC8-204ENST00000373560 MIEF2Q96C03 454 aa11.62□□□□□ -0.55
HDAC8-204ENST00000373560 CHRNA10Q9GZZ6 450 aa11.62□□□□□ -0.55
HDAC8-204ENST00000373560 TFB2MQ9H5Q4 396 aaKnown RBP11.62□□□□□ -0.55
HDAC8-204ENST00000373560 NLRC4Q9NPP4 1024 aa11.62□□□□□ -0.55
HDAC8-204ENST00000373560 EPHB6O15197 1021 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 MLYCDO95822 493 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 ZNF24P17028 368 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 MAGP20916 626 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 PDHA2P29803 388 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 MTIF2P46199 727 aaKnown RBP11.61□□□□□ -0.55
HDAC8-204ENST00000373560 SCTRP47872 440 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 KLK7P49862 253 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 FANCCQ00597 558 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 OXLD1Q5BKU9 147 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 DCUN1D2Q6PH85 259 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 UNC5AQ6ZN44 842 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 RIPOR1Q6ZS17 1223 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 MCATQ8IVS2 390 aaKnown RBP11.61□□□□□ -0.55
HDAC8-204ENST00000373560 CFAP206Q8IYR0 622 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 SHISA5Q8N114 240 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 EID3Q8N140 333 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 BRSK1Q8TDC3 778 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 TMEM158Q8WZ71 300 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.61□□□□□ -0.55
HDAC8-204ENST00000373560 VPS50Q96JG6 964 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 GANQ9H2C0 597 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 ZWILCHQ9H900 591 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 ACSL5Q9ULC5 683 aa11.61□□□□□ -0.55
HDAC8-204ENST00000373560 PLAGL1Q9UM63 463 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms