RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 CEP97Q8IW35 865 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 CHERPQ8IWX8 916 aaKnown RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 AVL9Q8NBF6 648 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 INO80EQ8NBZ0 244 aaPredicted RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 PROKR2Q8NFJ6 384 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 SLC25A36Q96CQ1 311 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 DGAT2Q96PD7 388 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 DENND2DQ9H6A0 471 aaPredicted RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 IL36AQ9UHA7 158 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 CFL2Q9Y281 166 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 CLCA3PQ9Y6N3 262 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 TCRBV7S2A1N4TA0A589 114 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 BTBD19C9JJ37 291 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 GPR25O00155 361 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 PGLSO95336 258 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 CSTF2P33240 577 aaKnown RBP eCLIP11.3□□□□□ -0.6
VCL-202ENST00000372755 DSTNP60981 165 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 ARF3P61204 181 aaPredicted RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 ARF1P84077 181 aaKnown RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 SPIN4Q56A73 249 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 CRB2Q5IJ48 1285 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 PRPF38BQ5VTL8 546 aaKnown RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 TPGS2Q68CL5 300 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 LRRC70Q7Z2Q7 622 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 IQCHQ86VS3 1027 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 BANPQ8N9N5 519 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 KCTD7Q96MP8 289 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 C11orf84Q9BUA3 381 aaPredicted RBP11.3□□□□□ -0.6
VCL-202ENST00000372755 ADAP2Q9NPF8 381 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 TLR6Q9Y2C9 796 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 ATRNO75882 1429 aa11.3□□□□□ -0.6
VCL-202ENST00000372755 AQP12BA6NM10 295 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 COQ9O75208 318 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 MTHFD1P11586 935 aaKnown RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 MLLT3P42568 568 aaPredicted RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 HCAR3P49019 387 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 CSTF1Q05048 431 aaKnown RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 SLC10A7Q0GE19 358 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 ZNF460Q14592 562 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 TIGD6Q17RP2 521 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 PDSS1Q5T2R2 415 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 GPR153Q6NV75 609 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 LBX2Q6XYB7 198 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 P4HA3Q7Z4N8 544 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 AQP12AQ8IXF9 295 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 CPNE2Q96FN4 548 aaPredicted RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 FCRL5Q96RD9 977 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 EHD1Q9H4M9 534 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 SPIN1Q9Y657 262 aaPredicted RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 EME2A4GXA9 379 aaPredicted RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 TTC34A8MYJ7 566 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 PIM1P11309 404 aaPredicted RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 IMPDH1P20839 514 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 GDI2P50395 445 aaKnown RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 ADAM17P78536 824 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 C4orf46Q504U0 113 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 GHDCQ8N2G8 530 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 COQ10BQ9H8M1 238 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 ZDHHC3Q9NYG2 299 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 IRAK2O43187 625 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 FIP1L1Q6UN15 594 aaKnown RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 PNPLA2Q96AD5 504 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 HBEGFQ99075 208 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 CHIAQ9BZP6 476 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 CD320Q9NPF0 282 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 ZCCHC3Q9NUD5 404 aaKnown RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 GRHL1Q9NZI5 618 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 NOX1Q9Y5S8 564 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 TLR4O00206 839 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 GNB5O14775 395 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 SLC22A1O15245 554 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 PSKH1P11801 424 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 PVALBP20472 110 aaPredicted RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 FSHRP23945 695 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 DNAJA1P31689 397 aaKnown RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 CSKP41240 450 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 GANABQ14697 944 aaKnown RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 ZNF782Q6ZMW2 699 aaPredicted RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 SLC29A4Q7RTT9 530 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 CAMKVQ8NCB2 501 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 ACDQ96AP0 544 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 GAL3ST1Q99999 423 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 C12orf65Q9H3J6 166 aaKnown RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 PTTG2Q9NZH5 202 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 RIMKLBQ9ULI2 386 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 ARL5AQ9Y689 179 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 EFNA1P20827 205 aaPredicted RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 TAS2R39P59534 338 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 ENPP2Q13822 863 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 TMEM164Q5U3C3 297 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 LRRC57Q8N9N7 239 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 TNFRSF25Q93038 417 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 RPL10LQ96L21 214 aaKnown RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 MTERF1Q99551 399 aaKnown RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 SDHAF3Q9NRP4 125 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 SNX10Q9Y5X0 201 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 KLRG2A4D1S0 409 aaPredicted RBP11.29□□□□□ -0.6
VCL-202ENST00000372755 ACTR1BP42025 376 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 ACTR1AP61163 376 aa11.29□□□□□ -0.6
VCL-202ENST00000372755 PRKCDQ05655 676 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms