RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 OR5M11Q96RB7 305 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 FBXO8Q9NRD0 319 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 GIMAP4Q9NUV9 329 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 RLIMQ9NVW2 624 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 GPRC5BQ9NZH0 403 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 EHD3Q9NZN3 535 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 PDP1Q9P0J1 537 aaPredicted RBP5.29□□□□□ -1.56
ATG4A-204ENST00000372246 DNAJB9Q9UBS3 223 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 OSGIN1Q9UJX0 560 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 PCTPQ9UKL6 214 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 GMPPBQ9Y5P6 360 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 H3BQ06 376 aaPredicted RBP5.29□□□□□ -1.56
ATG4A-204ENST00000372246 E2F3O00716 465 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 SLC22A1O15245 554 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 MTSS1O43312 755 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 CREG1O75629 220 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 GLP2RO95838 553 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 PTHP01270 115 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 OPN1SWP03999 348 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 KRT8P05787 483 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 FGF4P08620 206 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ALOX5P09917 674 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ATXN1LP0C7T5 689 aaKnown RBP5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ACPPP15309 386 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 CCNCP24863 283 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 SERPINB10P48595 397 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 IDH2P48735 452 aaKnown RBP5.29□□□□□ -1.56
ATG4A-204ENST00000372246 HSPA7P48741 367 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 SCNN1GP51170 649 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 CLCN7P51798 805 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 KPNA2P52292 529 aaKnown RBP5.29□□□□□ -1.56
ATG4A-204ENST00000372246 OAZ1P54368 228 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 RAB15P59190 212 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 BAK1Q16611 211 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 TBRG1Q3YBR2 411 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 XKR7Q5GH72 579 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 PIK3R6Q5UE93 754 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 DCAF15Q66K64 600 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 PM20D1Q6GTS8 502 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ALKAL1Q6UXT8 129 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 Q6ZVU0 165 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 BCDIN3DQ7Z5W3 292 aaKnown RBP5.29□□□□□ -1.56
ATG4A-204ENST00000372246 RAB44Q7Z6P3 723 aaPredicted RBP5.29□□□□□ -1.56
ATG4A-204ENST00000372246 KRT77Q7Z794 578 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ZDHHC21Q8IVQ6 265 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 GALNT12Q8IXK2 581 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 LINC00528Q8N1L1 170 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 LINC01465Q8N7H1 131 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 EFHBQ8N7U6 833 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ASCC1Q8N9N2 400 aaKnown RBP5.29□□□□□ -1.56
ATG4A-204ENST00000372246 TTC29Q8NA56 475 aaPredicted RBP5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ATG16L2Q8NAA4 619 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 OR7G1Q8NGA0 311 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 GPR150Q8NGU9 434 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 GTF2H4Q92759 462 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 MAL2Q969L2 176 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 MYLPFQ96A32 169 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 LINGO1Q96FE5 620 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 TRMT61AQ96FX7 289 aaKnown RBP5.29□□□□□ -1.56
ATG4A-204ENST00000372246 TPD52L3Q96J77 140 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ST6GAL2Q96JF0 529 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 CNDP2Q96KP4 475 aaKnown RBP5.29□□□□□ -1.56
ATG4A-204ENST00000372246 TNIP3Q96KP6 325 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ZNF560Q96MR9 790 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 ZNF599Q96NL3 588 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 TSSK3Q96PN8 268 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 SEMA3CQ99985 751 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 KATNAL1Q9BW62 490 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 APOL5Q9BWW9 433 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 NSUN3Q9H649 340 aaKnown RBP5.29□□□□□ -1.56
ATG4A-204ENST00000372246 AS3MTQ9HBK9 375 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 DCAF16Q9NXF7 216 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 HACD3Q9P035 362 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 RBPJLQ9UBG7 517 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 TBC1D24Q9ULP9 559 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 HS3ST4Q9Y661 456 aa5.29□□□□□ -1.56
ATG4A-204ENST00000372246 NYNRINQ9P2P1 1898 aaKnown RBP5.28□□□□□ -1.56
ATG4A-204ENST00000372246 A0A0D9SEW6 157 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 ELOVL7A1L3X0 281 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 FAM234BA2RU67 622 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 OR2A25A4D2G3 310 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 METTL15A6NJ78 407 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 A8MUA0 341 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 E9PAM4 449 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 FAM227AF5H4B4 570 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 TERTO14746 1132 aaKnown RBP5.28□□□□□ -1.56
ATG4A-204ENST00000372246 ANKRD28O15084 1053 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 NCAM2O15394 837 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 RGS10O43665 173 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 SGTAO43765 313 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 CACNG3O60359 315 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 PRAMEF12O95522 483 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 NDST3O95803 873 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 POMCP01189 267 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 PRR35P0CG20 571 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 S100A5P33763 92 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 PIK3CBP42338 1070 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 HTR3AP46098 478 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 OR1E2P47887 323 aa5.28□□□□□ -1.56
ATG4A-204ENST00000372246 ST13P50502 369 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms