RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 Q96MF0 132 aa7.77□□□□□ -1.17
YBX3-204ENST00000366290 CSPG4P5Q96PW8 444 aa7.77□□□□□ -1.17
YBX3-204ENST00000366290 MAGEH1Q9H213 219 aa7.77□□□□□ -1.17
YBX3-204ENST00000366290 ETNK2Q9NVF9 386 aa7.77□□□□□ -1.17
YBX3-204ENST00000366290 LRFN1Q9P244 771 aa7.77□□□□□ -1.17
YBX3-204ENST00000366290 ANGPTL2Q9UKU9 493 aa7.77□□□□□ -1.17
YBX3-204ENST00000366290 NCKAP1Q9Y2A7 1128 aa7.77□□□□□ -1.17
YBX3-204ENST00000366290 FAM208BQ5VWN6 2430 aa7.77□□□□□ -1.17
YBX3-204ENST00000366290 PLXNA2O75051 1894 aa7.77□□□□□ -1.17
YBX3-204ENST00000366290 ATXN2Q99700 1313 aaKnown RBP7.77□□□□□ -1.17
YBX3-204ENST00000366290 DSPP15924 2871 aaKnown RBP7.77□□□□□ -1.17
YBX3-204ENST00000366290 ATRXP46100 2492 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 NBEAQ8NFP9 2946 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 ZSCAN5CA6NGD5 496 aaPredicted RBP7.76□□□□□ -1.17
YBX3-204ENST00000366290 LRRC72A6NJI9 287 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 ZAR1LA6NP61 321 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 MEI4A8MW99 385 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 ZNF487B1APH4 448 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 K7ERQ8 282 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 AGPSO00116 658 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 YY2O15391 372 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 ZSCAN12O43309 604 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 SMAD6O43541 496 aaKnown RBP7.76□□□□□ -1.17
YBX3-204ENST00000366290 PLRG1O43660 514 aaKnown RBP7.76□□□□□ -1.17
YBX3-204ENST00000366290 CCNT2O60583 730 aaKnown RBP7.76□□□□□ -1.17
YBX3-204ENST00000366290 RNASEH2AO75792 299 aaKnown RBP7.76□□□□□ -1.17
YBX3-204ENST00000366290 CTSLP07711 333 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 ZNF883P0CG24 379 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 TNNT1P13805 278 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 ERCC2P18074 760 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 TNFRSF1AP19438 455 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 EPHA3P29320 983 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 EPHB2P29323 1055 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 NUDT1P36639 197 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 CDKN2BP42772 138 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 PSMD8P48556 350 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 ADPRHP54922 357 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 GEMIN4P57678 1058 aaKnown RBP7.76□□□□□ -1.17
YBX3-204ENST00000366290 YBEYP58557 167 aaPredicted RBP7.76□□□□□ -1.17
YBX3-204ENST00000366290 NSUN2Q08J23 767 aaKnown RBP eCLIP7.76□□□□□ -1.17
YBX3-204ENST00000366290 GPS1Q13098 491 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 PTK2BQ14289 1009 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 PDK2Q15119 407 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 SLC9A4Q6AI14 798 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 RWDD4Q6NW29 188 aaKnown RBP7.76□□□□□ -1.17
YBX3-204ENST00000366290 AADACL2Q6P093 401 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 C22orf39Q6P5X5 142 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 IL27RAQ6UWB1 636 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 MFSD7Q6UXD7 560 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 PEX26Q7Z412 305 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 MAVSQ7Z434 540 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 PIP4P1Q86T03 277 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 VSIG1Q86XK7 387 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 ARHGAP12Q8IWW6 846 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 KATNAL2Q8IYT4 538 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 SYCE1Q8N0S2 351 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 PCDH20Q8N6Y1 951 aaKnown RBP7.76□□□□□ -1.17
YBX3-204ENST00000366290 STYXQ8WUJ0 223 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 ARHGEF2Q92974 986 aaKnown RBP7.76□□□□□ -1.17
YBX3-204ENST00000366290 FKBP10Q96AY3 582 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 ZDHHC12Q96GR4 267 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 CCDC114Q96M63 670 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 HIST1H2AAQ96QV6 131 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 OMDQ99983 421 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 AIFM2Q9BRQ8 373 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 ZNF670Q9BS34 389 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 NEUROG2Q9H2A3 272 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 LRRC19Q9H756 370 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 GLOD4Q9HC38 313 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 DONSONQ9NYP3 566 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 RCOR3Q9P2K3 495 aaPredicted RBP7.76□□□□□ -1.17
YBX3-204ENST00000366290 AMFRQ9UKV5 643 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 SARDHQ9UL12 918 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 PKD1L2Q7Z442 2459 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 CELSR3Q9NYQ7 3312 aa7.76□□□□□ -1.17
YBX3-204ENST00000366290 FREM2Q5SZK8 3169 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 GOLGA4Q13439 2230 aaKnown RBP7.75□□□□□ -1.17
YBX3-204ENST00000366290 TMEM131Q92545 1883 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 hCG_1818297A0A087WSY0 165 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 LRRD1A4D1F6 860 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 MATN3O15232 486 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 KDELR3O43731 214 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 RAMP2O60895 175 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 GSRP00390 522 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 IL1BP01584 269 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 PROS1P07225 676 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 CEACAM1P13688 526 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 CHRNA3P32297 505 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 SERPINF1P36955 418 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 ACVRL1P37023 503 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 NUMBP49757 651 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 TAS2R38P59533 333 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 BNC1Q01954 994 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 CNTN1Q12860 1018 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 SLC10A2Q12908 348 aaPredicted RBP7.75□□□□□ -1.17
YBX3-204ENST00000366290 GRIK2Q13002 908 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 KRT81Q14533 505 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 TBCCQ15814 346 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 PARP15Q460N3 678 aa7.75□□□□□ -1.17
YBX3-204ENST00000366290 ACCSLQ4AC99 568 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms