RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 PSMC4P43686 418 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 RIDAP52758 137 aaKnown RBP-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 LBX1P52954 281 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 RPS3AP61247 264 aaKnown RBP-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 FAM193AP78312 1265 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 SRPXP78539 464 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 PRKCEQ02156 737 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 PPP2R5BQ15173 497 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 TAF11Q15544 211 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 ZNF74Q16587 644 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 ZNF311Q5JNZ3 666 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 CYB5R2Q6BCY4 276 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 PPP4R4Q6NUP7 873 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 ZNF600Q6ZNG1 722 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 RINLQ6ZS11 566 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 RAB11FIP2Q7L804 512 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 CPEB2Q7Z5Q1 589 aaKnown RBP-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 LRRC49Q8IUZ0 686 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 ARHGAP12Q8IWW6 846 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 SAXO1Q8IYX7 474 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 GCSAMQ8N6F7 178 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 ARIH2OSQ8N7S6 290 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 SYT14Q8NB59 555 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 SLC38A9Q8NBW4 561 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 HJURPQ8NCD3 748 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 ZNF596Q8TC21 504 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 SMARCD2Q92925 531 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 ZNF566Q969W8 418 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 FAF2Q96CS3 445 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 PABPC5Q96DU9 382 aaKnown RBP-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 HOOK2Q96ED9 719 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 EGLN2Q96KS0 407 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 ACOX2Q99424 681 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 PCGF1Q9BSM1 259 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 RHOBTB2Q9BYZ6 727 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 LTB4R2Q9NPC1 389 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 NDUFAF4Q9P032 175 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 ARMCX1Q9P291 453 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 ABI3Q9P2A4 366 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 LNPEPQ9UIQ6 1025 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 C19orf53Q9UNZ5 99 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 FER1L5A0AVI2 2057 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 MALRD1Q5VYJ5 2156 aa-0.49□□□□□ -2.49
RNU6-340P-201ENST00000364005 IGHV3-20A0A0C4DH32 117 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 EIF4E1BA6NMX2 242 aaKnown RBP-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 USP27XA6NNY8 438 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 SEC14L5O43304 696 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 N4BP1O75113 896 aaKnown RBP-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 RHBDL1O75783 438 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 ACSL3O95573 720 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 C6orf47O95873 294 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 HRGP04196 525 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 HEXAP06865 529 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 TNNT1P13805 278 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 SELEP16581 610 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 FUT3P21217 361 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 EEF1GP26641 437 aaKnown RBP-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 HOXC9P31274 260 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 STT3AP46977 705 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 ZNF75DP51815 510 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 NDST2P52849 883 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 CDC16Q13042 620 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 PDE1CQ14123 709 aaPredicted RBP-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 HIST2H2ACQ16777 129 aaPredicted RBP-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 SLC35G1Q2M3R5 365 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 KRTAP6-1Q3LI64 71 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 PDLIM3Q53GG5 364 aaPredicted RBP-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 ZNF667Q5HYK9 610 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 FBXO47Q5MNV8 452 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 LCN1P1Q5VSP4 162 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 DPPA4Q7L190 304 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 RPAINQ86UA6 219 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 AMIGO1Q86WK6 493 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 GATAD2AQ86YP4 633 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 SPICE1Q8N0Z3 855 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 PRPF38AQ8NAV1 312 aaKnown RBP-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 LINS1Q8NG48 757 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 OR5T2Q8NGG2 359 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 SLC22A18Q96BI1 424 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 C3orf49Q96BT1 292 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 TAAR6Q96RI8 345 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 RTKNQ9BST9 563 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 TM7SF3Q9NS93 570 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 C1orf112Q9NSG2 853 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 EXD2Q9NVH0 621 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 P4HTMQ9NXG6 502 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 B3GAT1Q9P2W7 334 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 OR14J1Q9UGF5 321 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 ITGA11Q9UKX5 1188 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 R3HDM2Q9Y2K5 976 aaKnown RBP-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 PCDHGB6Q9Y5F9 930 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 AUP1Q9Y679 476 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 CLCA3PQ9Y6N3 262 aa-0.5□□□□□ -2.49
RNU6-340P-201ENST00000364005 GSAPA4D1B5 854 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 H0YAE9 185 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 K7EQG2 157 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 ZBTB43O43298 467 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 TLX2O43763 284 aaPredicted RBP-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 ZBED1O96006 694 aa-0.51□□□□□ -2.49
RNU6-340P-201ENST00000364005 RPL35AP18077 110 aaKnown RBP-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms