RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 FKBP6O75344 327 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 WFS1O76024 890 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 NPIPA8P0DM63 369 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 PSEN1P49768 467 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 PIGFQ07326 219 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 CWF19L1Q69YN2 538 aaKnown RBP7.19□□□□□ -1.26
VPS13A-202ENST00000357409 KIF18BQ86Y91 864 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 ARRDC3Q96B67 414 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 PTCHD1Q96NR3 888 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 FAM237AA0A1B0GTK4 181 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 ELOA3DA6NLF2 546 aaPredicted RBP7.19□□□□□ -1.26
VPS13A-202ENST00000357409 M0R2N6 131 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 HAS3O00219 553 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 CILPO75339 1184 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 SEC24AO95486 1093 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 PDX1P52945 283 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 ZXDBP98169 803 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 ELOA3BQ3SY89 546 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 CNKSR3Q6P9H4 555 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 ELOA3Q8NG57 546 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 OR2T12Q8NG77 320 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 NSMAFQ92636 917 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 ZC3HAV1LQ96H79 300 aaKnown RBP7.19□□□□□ -1.26
VPS13A-202ENST00000357409 ACBD6Q9BR61 282 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 KCNK12Q9HB15 430 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 ANKRD10Q9NXR5 420 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 UTS2RQ9UKP6 389 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 SRCAPQ6ZRS2 3230 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 GXYLT2A0PJZ3 443 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 C9J4A7 227 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 MATN3O15232 486 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 PCDH7O60245 1069 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 NME6O75414 186 aaPredicted RBP7.19□□□□□ -1.26
VPS13A-202ENST00000357409 EDNRAP25101 427 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 ADH7P40394 386 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 TAS2R50P59544 299 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 SPANXN2Q5MJ10 180 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 HSDL2Q6YN16 418 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 TAS1R1Q7RTX1 841 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 ZNF808Q8N4W9 903 aaPredicted RBP7.19□□□□□ -1.26
VPS13A-202ENST00000357409 POGLUT1Q8NBL1 392 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 OSCP1Q8WVF1 389 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 TFGQ92734 400 aaPredicted RBP7.19□□□□□ -1.26
VPS13A-202ENST00000357409 EFHD2Q96C19 240 aaPredicted RBP7.19□□□□□ -1.26
VPS13A-202ENST00000357409 TM9SF2Q99805 663 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 C17orf62Q9BQA9 187 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 SLC25A23Q9BV35 468 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 NANSQ9NR45 359 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 ABCA8O94911 1581 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 CTTNBP2Q8WZ74 1663 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 C5orf51A6NDU8 294 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 WNT9AO14904 365 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 PSMG1O95456 288 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 CNOT4O95628 575 aaKnown RBP7.19□□□□□ -1.26
VPS13A-202ENST00000357409 CHRNA1P02708 482 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 DEFB103AP81534 67 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 GALK2Q01415 458 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 SQLEQ14534 574 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 SYT16Q17RD7 645 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 TSTD2Q5T7W7 516 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 LRRC66Q68CR7 880 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 RPLP0P6Q8NHW5 317 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 NFKBIDQ8NI38 313 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 HSD17B14Q9BPX1 270 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 C9orf16Q9BUW7 83 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 FRMD8Q9BZ67 464 aaPredicted RBP7.19□□□□□ -1.26
VPS13A-202ENST00000357409 VNN1O95497 513 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 KLF10Q13118 480 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 CDKN3Q16667 212 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 NIPA1Q7RTP0 329 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 CKAP2Q8WWK9 683 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 SPATA5L1Q9BVQ7 753 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 RAP2CQ9Y3L5 183 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 DHRS12A0PJE2 317 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 PLIN3O60664 434 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 CSTBP04080 98 aaKnown RBP7.19□□□□□ -1.26
VPS13A-202ENST00000357409 MSL3P1P0C860 447 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 CASRP41180 1078 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 EOGTQ5NDL2 527 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 RAET1LQ5VY80 246 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 TSSK4Q6SA08 328 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 SNX29P2Q8IUI4 249 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 CPT1BQ92523 772 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 ZHX1-C8orf76Q96EF9 292 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 KCNH6Q9H252 994 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 SMURF1Q9HCE7 757 aa7.19□□□□□ -1.26
VPS13A-202ENST00000357409 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.18□□□□□ -1.26
VPS13A-202ENST00000357409 CDC14CA4D256 554 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 CHADO15335 359 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 NDST3O95803 873 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 DRD4P21917 467 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 FASLGP48023 281 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 SQSTM1Q13501 440 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 UGT8Q16880 541 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 TCEAL6Q6IPX3 200 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 ALG3Q92685 438 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 C19orf60Q96EN9 201 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 STRA6Q9BX79 667 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 SMURF2Q9HAU4 748 aa7.18□□□□□ -1.26
VPS13A-202ENST00000357409 LUZP4Q9P127 313 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms