RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 TLR5O60602 858 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 PAPSS2O95340 614 aaPredicted RBP9.17□□□□□ -0.94
SMG6-202ENST00000354901 HTR1AP08908 422 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 HSMCR30P0CW71 290 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 CD36P16671 472 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 IL32P24001 234 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 HTR7P34969 479 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 PIGAP37287 484 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 PIK3CGP48736 1102 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 AKR1D1P51857 326 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 STC1P52823 247 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 KCNK10P57789 538 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 IL10RBQ08334 325 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 TRAP1Q12931 704 aaKnown RBP9.17□□□□□ -0.94
SMG6-202ENST00000354901 SLC14A2Q15849 920 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 AAK1Q2M2I8 961 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 CTU2Q2VPK5 515 aaKnown RBP9.17□□□□□ -0.94
SMG6-202ENST00000354901 BTBD16Q32M84 506 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 C18orf21Q32NC0 220 aaPredicted RBP9.17□□□□□ -0.94
SMG6-202ENST00000354901 CYP27C1Q4G0S4 372 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 TOR2AQ5JU69 321 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 CLLU1OSQ5K130 101 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 NADSYN1Q6IA69 706 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 RTN4RL1Q86UN2 441 aaPredicted RBP9.17□□□□□ -0.94
SMG6-202ENST00000354901 PIANPQ8IYJ0 282 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 TRPV3Q8NET8 790 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 OR8H1Q8NGG4 311 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 TMBIM1Q969X1 311 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 ASIC4Q96FT7 647 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 AMBNQ9NP70 447 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 TIGARQ9NQ88 270 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 RASSF1Q9NS23 344 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 INTS7Q9NVH2 962 aaKnown RBP9.17□□□□□ -0.94
SMG6-202ENST00000354901 EIF2B4Q9UI10 523 aaKnown RBP9.17□□□□□ -0.94
SMG6-202ENST00000354901 HSPB11Q9Y547 144 aa9.17□□□□□ -0.94
SMG6-202ENST00000354901 PRR23AA6NEV1 266 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 SLC22A1O15245 554 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 OR4F21O95013 312 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 FKBP9O95302 570 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 FGF1P05230 155 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 GSTM1P09488 218 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 ELNP15502 786 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 TYMPP19971 482 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 FLT3LGP49771 235 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 PSAPL1Q6NUJ1 521 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 BEND5Q7L4P6 421 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 SYVN1Q86TM6 617 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 PACRGLQ8N7B6 248 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 STAG3L4Q8TBR4 150 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 PNPT1Q8TCS8 783 aaKnown RBP9.16□□□□□ -0.94
SMG6-202ENST00000354901 RASSF5Q8WWW0 418 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 LGALS12Q96DT0 336 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 GPR62Q9BZJ7 368 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 ALG2Q9H553 416 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 FKBPLQ9UIM3 349 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 SARDHQ9UL12 918 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 OGDHLQ9ULD0 1010 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 ABT1Q9ULW3 272 aaKnown RBP9.16□□□□□ -0.94
SMG6-202ENST00000354901 DOCK4Q8N1I0 1966 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 F5H5T6 163 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 GNRH1P01148 92 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 LCKP06239 509 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 ICAM2P13598 275 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 HLA-DPA1P20036 260 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 TACR2P21452 398 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 CST5P28325 142 aaPredicted RBP9.16□□□□□ -0.94
SMG6-202ENST00000354901 RFC2P35250 354 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 GSK3BP49841 420 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 ARSFP54793 590 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 EMX1Q04741 257 aaPredicted RBP9.16□□□□□ -0.94
SMG6-202ENST00000354901 RAD51Q06609 339 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 LCP2Q13094 533 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 DENND1CQ8IV53 801 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 FNDC5Q8NAU1 212 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 OR52B6Q8NGF0 335 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 PPM1MQ96MI6 270 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 SNX18Q96RF0 628 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 AIFM2Q9BRQ8 373 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 COPS4Q9BT78 406 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 CINPQ9BW66 212 aaPredicted RBP9.16□□□□□ -0.94
SMG6-202ENST00000354901 MCCC2Q9HCC0 563 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 MAN2B2Q9Y2E5 1009 aa9.16□□□□□ -0.94
SMG6-202ENST00000354901 CIB4A0PJX0 185 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 WASH4PA8MWX3 477 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 LOC110117498-PIK3R3F6TDL0 507 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 SEPT4O43236 478 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 MED26O95402 600 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 GUCA1CO95843 209 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 CAPNS1P04632 268 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 YES1P07947 543 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 HOXD10P28358 340 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 CCND3P30281 292 aaPredicted RBP9.15□□□□□ -0.94
SMG6-202ENST00000354901 GGT5P36269 586 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 LIPEQ05469 1076 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 GALNT1Q10472 559 aaPredicted RBP9.15□□□□□ -0.94
SMG6-202ENST00000354901 PAMR1Q6UXH9 720 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 MDGA1Q8NFP4 955 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 EEF1AKMT1Q8WVE0 214 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 ROPN1LQ96C74 230 aa9.15□□□□□ -0.94
SMG6-202ENST00000354901 BDH2Q9BUT1 245 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms