RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 MYBL1P10243 752 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 SRSF11Q05519 484 aaKnown RBP10.79□□□□□ -0.68
RTN3-204ENST00000354497 AP1B1Q10567 949 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 PIGHQ14442 188 aaPredicted RBP10.79□□□□□ -0.68
RTN3-204ENST00000354497 TESK1Q15569 626 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 HADHQ16836 314 aaKnown RBP10.79□□□□□ -0.68
RTN3-204ENST00000354497 GPRC6AQ5T6X5 926 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 MTFR2Q6P444 385 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 TMEM207Q6UWW9 146 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 RPTNQ6XPR3 784 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 SPNS3Q6ZMD2 512 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 ZNF295-AS1Q8N0V1 137 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 ZNF655Q8N720 491 aaPredicted RBP10.79□□□□□ -0.68
RTN3-204ENST00000354497 CNTD1Q8N815 330 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 ACVR1CQ8NER5 493 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 PROKR1Q8TCW9 393 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 CHTF18Q8WVB6 975 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 DHRS1Q96LJ7 313 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 SYT11Q9BT88 431 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 MAK16Q9BXY0 300 aaKnown RBP10.79□□□□□ -0.68
RTN3-204ENST00000354497 PHACTR1Q9C0D0 580 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 XKR8Q9H6D3 395 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 IL26Q9NPH9 171 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 FANCLQ9NW38 375 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 ANAPC7Q9UJX3 599 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 ACSL5Q9ULC5 683 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 LRRC42Q9Y546 428 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 HEBP2Q9Y5Z4 205 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 AP1M2Q9Y6Q5 423 aa10.79□□□□□ -0.68
RTN3-204ENST00000354497 GLYATL1P3A0A0U1RQE8 302 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 MGAT4DA6NG13 374 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 LRRC53A6NM62 1247 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 C2orf74A8MZ97 194 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 PCDH17O14917 1159 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 KCNN4O15554 427 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 BUD23O43709 281 aaKnown RBP10.78□□□□□ -0.68
RTN3-204ENST00000354497 PMPCBO75439 489 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 TPPPO94811 219 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 CCDC175P0C221 793 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 MSL3P1P0C860 447 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 TROVE2P10155 538 aaKnown RBP eCLIP10.78□□□□□ -0.68
RTN3-204ENST00000354497 ALAS2P22557 587 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 LSP1P33241 339 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 ARG2P78540 354 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 NOMO1Q15155 1222 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 NKAIN1Q4KMZ8 207 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 ATP13A4Q4VNC1 1196 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 RHBDD2Q6NTF9 364 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 IGFL2Q6UWQ7 119 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 SHISA6Q6ZSJ9 500 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 ZNF571Q7Z3V5 609 aaPredicted RBP10.78□□□□□ -0.68
RTN3-204ENST00000354497 DAAM2Q86T65 1068 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 CFAP206Q8IYR0 622 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 DDHD1Q8NEL9 900 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 SPATA22Q8NHS9 363 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 ENOX1Q8TC92 643 aaKnown RBP10.78□□□□□ -0.68
RTN3-204ENST00000354497 HDAC11Q96DB2 347 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 ZNF570Q96NI8 536 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 PITPNM3Q9BZ71 974 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 LHPPQ9H008 270 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 FAM60AQ9NP50 221 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 ACTR10Q9NZ32 417 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 UBP1Q9NZI7 540 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 IP6K2Q9UHH9 426 aa10.78□□□□□ -0.68
RTN3-204ENST00000354497 CTAGE9A4FU28 777 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 HMGB1P1B2RPK0 211 aaPredicted RBP10.77□□□□□ -0.68
RTN3-204ENST00000354497 C19orf84I3L1E1 186 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 NDST3O95803 873 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 CTSBP07858 339 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 ESRRAP11474 423 aaPredicted RBP10.77□□□□□ -0.68
RTN3-204ENST00000354497 CPA3P15088 417 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 CAPN3P20807 821 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 PBX1P40424 430 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 TDGF1P3P51864 188 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 CASP6P55212 293 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 IFI35P80217 286 aaPredicted RBP10.77□□□□□ -0.68
RTN3-204ENST00000354497 TMPRSS15P98073 1019 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 TLE4Q04727 773 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 SLC10A2Q12908 348 aaPredicted RBP10.77□□□□□ -0.68
RTN3-204ENST00000354497 RBBP7Q16576 425 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 MRPL14Q6P1L8 145 aaKnown RBP10.77□□□□□ -0.68
RTN3-204ENST00000354497 C16orf87Q6PH81 154 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 ISLR2Q6UXK2 745 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 CEP97Q8IW35 865 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 LMNTD2Q8IXW0 634 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 SLC25A41Q8N5S1 370 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 LILRA3Q8N6C8 439 aaPredicted RBP10.77□□□□□ -0.68
RTN3-204ENST00000354497 C19orf47Q8N9M1 422 aaKnown RBP10.77□□□□□ -0.68
RTN3-204ENST00000354497 OR2L2Q8NH16 312 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 AENQ8WTP8 325 aaKnown RBP10.77□□□□□ -0.68
RTN3-204ENST00000354497 NR4A3Q92570 626 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 IMP4Q96G21 291 aaKnown RBP10.77□□□□□ -0.68
RTN3-204ENST00000354497 PANX2Q96RD6 677 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 SRPK1Q96SB4 655 aaKnown RBP10.77□□□□□ -0.68
RTN3-204ENST00000354497 NDC1Q9BTX1 674 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 HGH1Q9BTY7 390 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 VCXQ9H320 206 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 HEY1Q9Y5J3 304 aa10.77□□□□□ -0.68
RTN3-204ENST00000354497 POLEQ07864 2286 aa10.77□□□□□ -0.69
RTN3-204ENST00000354497 IFRD1O00458 451 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms