RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 DGKGP49619 791 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 CDKN1CP49918 316 aaPredicted RBP8.02□□□□□ -1.13
CD44-205ENST00000352818 CLCN7P51798 805 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 CCNHP51946 323 aaPredicted RBP8.02□□□□□ -1.13
CD44-205ENST00000352818 LCP2Q13094 533 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 CAMK2GQ13555 558 aaPredicted RBP8.02□□□□□ -1.13
CD44-205ENST00000352818 SQLEQ14534 574 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 MAPRE2Q15555 327 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 ZRSR2Q15696 482 aaKnown RBP8.02□□□□□ -1.13
CD44-205ENST00000352818 PDCD2Q16342 344 aaPredicted RBP8.02□□□□□ -1.13
CD44-205ENST00000352818 C6orf163Q5TEZ5 329 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 KANK2Q63ZY3 851 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 TMEM215Q68D42 235 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 METTL2BQ6P1Q9 378 aaKnown RBP8.02□□□□□ -1.13
CD44-205ENST00000352818 PGM2L1Q6PCE3 622 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 MACC1Q6ZN28 852 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 EFL1Q7Z2Z2 1120 aaKnown RBP8.02□□□□□ -1.13
CD44-205ENST00000352818 ADAMTSL2Q86TH1 951 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 SERPINA9Q86WD7 417 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 CLYBLQ8N0X4 340 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 FBXO39Q8N4B4 442 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 OR2T3Q8NH03 318 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 WDR36Q8NI36 951 aaKnown RBP8.02□□□□□ -1.13
CD44-205ENST00000352818 AGR3Q8TD06 166 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 HCAR2Q8TDS4 363 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 ZNF483Q8TF39 744 aaPredicted RBP8.02□□□□□ -1.13
CD44-205ENST00000352818 BHMTQ93088 406 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 FUBP1Q96AE4 644 aaKnown RBP8.02□□□□□ -1.13
CD44-205ENST00000352818 ULK4Q96C45 1275 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 PHF21BQ96EK2 531 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 APOLD1Q96LR9 279 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 PLEKHG4BQ96PX9 1271 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 BBS2Q9BXC9 721 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 CLPBQ9H078 707 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 TMEM245Q9H330 911 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 SUV39H2Q9H5I1 410 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 WDR55Q9H6Y2 383 aaPredicted RBP8.02□□□□□ -1.13
CD44-205ENST00000352818 ZBTB26Q9HCK0 441 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 BPIFA1Q9NP55 256 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 LATS2Q9NRM7 1088 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 PRPF19Q9UMS4 504 aaKnown RBP8.02□□□□□ -1.13
CD44-205ENST00000352818 TRAF6Q9Y4K3 522 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 PRRC2CQ9Y520 2896 aaKnown RBP8.02□□□□□ -1.13
CD44-205ENST00000352818 PCSK5Q92824 1860 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 DCHS2Q6V1P9 2916 aa8.02□□□□□ -1.13
CD44-205ENST00000352818 IGLV3-16A0A075B6K0 115 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 A0A088AWK7 358 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 GLYATL1P3A0A0U1RQE8 302 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 NPEPPSL1A6NEC2 478 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 NPIPB15A6NHN6 443 aaPredicted RBP8.01□□□□□ -1.13
CD44-205ENST00000352818 TMEM233B4DJY2 109 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 SUPT3HB4E1H0 165 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 E5RI56 91 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 K7EM74 188 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 BTN3A1O00481 513 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 NEMP1O14524 444 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 UBFD1O14562 309 aaKnown RBP8.01□□□□□ -1.13
CD44-205ENST00000352818 OR1I1O60431 355 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 VPS4BO75351 444 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 SUPT3HO75486 399 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 SUPT7LO94864 414 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 CDK14O94921 469 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 CLDN7O95471 211 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 MLYCDO95822 493 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 LDLRP01130 860 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 ASLP04424 464 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 SRPRAP08240 638 aaKnown RBP8.01□□□□□ -1.13
CD44-205ENST00000352818 GFAPP14136 432 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 GNAZP19086 355 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 ITGAXP20702 1163 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 DGKAP23743 735 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 NFKBIAP25963 317 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 CTSOP43234 321 aaPredicted RBP8.01□□□□□ -1.13
CD44-205ENST00000352818 STK19P49842 368 aaPredicted RBP8.01□□□□□ -1.13
CD44-205ENST00000352818 DCDC1P59894 354 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 POLR2LP62875 67 aaKnown RBP8.01□□□□□ -1.13
CD44-205ENST00000352818 MXRA7P84157 204 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 TSNQ15631 228 aaKnown RBP8.01□□□□□ -1.13
CD44-205ENST00000352818 PFKFB4Q16877 469 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 UGT3A2Q3SY77 523 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 CMPK2Q5EBM0 449 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 ANKS6Q68DC2 871 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 BRAT1Q6PJG6 821 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 CRTC1Q6UUV9 634 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 C16orf89Q6UX73 402 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 FAM151BQ6UXP7 276 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 TAS2R42Q7RTR8 314 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 ADIPOR2Q86V24 386 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 ZSWIM9Q86XI8 627 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 DTX1Q86Y01 620 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 RAVER1Q8IY67 606 aaKnown RBP8.01□□□□□ -1.13
CD44-205ENST00000352818 NXPE1Q8N323 547 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 ZNF366Q8N895 744 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 SIDT2Q8NBJ9 832 aaKnown RBP8.01□□□□□ -1.13
CD44-205ENST00000352818 PDPRQ8NCN5 879 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 GALNT11Q8NCW6 608 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 FBXO27Q8NI29 283 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 C9orf43Q8TAL5 461 aaPredicted RBP8.01□□□□□ -1.13
CD44-205ENST00000352818 UBTD2Q8WUN7 234 aa8.01□□□□□ -1.13
CD44-205ENST00000352818 JADE3Q92613 823 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms