RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 RBM4Q9BWF3 364 aaKnown RBP21.54■■□□□ 1.04
UPF3A-201ENST00000351487 DNAJC11Q9NVH1 559 aa21.54■■□□□ 1.04
UPF3A-201ENST00000351487 UTS2RQ9UKP6 389 aa21.54■■□□□ 1.04
UPF3A-201ENST00000351487 C8AP07357 584 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 ZNF30P17039 623 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 TACR1P25103 407 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 YAP1P46937 504 aaKnown RBP21.53■■□□□ 1.04
UPF3A-201ENST00000351487 NEK2P51955 445 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 IST1P53990 364 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 ABHD18Q0P651 414 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 ADHFE1Q8IWW8 467 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 C10orf111Q8N326 155 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 ZCCHC7Q8N3Z6 543 aaKnown RBP21.53■■□□□ 1.04
UPF3A-201ENST00000351487 GFM2Q969S9 779 aaKnown RBP21.53■■□□□ 1.04
UPF3A-201ENST00000351487 NCLNQ969V3 563 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 REXO5Q96IC2 774 aaKnown RBP21.53■■□□□ 1.04
UPF3A-201ENST00000351487 TSSK3Q96PN8 268 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 P2RY13Q9BPV8 354 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 TRIM64BA6NI03 449 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 WASH3PC4AMC7 463 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 PER2O15055 1255 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 PRAMEF4O60810 478 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 RECQL5O94762 991 aaPredicted RBP21.53■■□□□ 1.04
UPF3A-201ENST00000351487 DCDC1P59894 354 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 POLR2LP62875 67 aaKnown RBP21.53■■□□□ 1.04
UPF3A-201ENST00000351487 SLC44A4Q53GD3 710 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 RBM48Q5RL73 367 aaKnown RBP21.53■■□□□ 1.04
UPF3A-201ENST00000351487 PRAMEF9Q5VWM5 478 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 FRG2Q64ET8 278 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 C8orf59Q8N0T1 100 aaPredicted RBP21.53■■□□□ 1.04
UPF3A-201ENST00000351487 CHST14Q8NCH0 376 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 APIPQ96GX9 242 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 FRG2BQ96QU4 278 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 MBOAT4Q96T53 435 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 INPP5KQ9BT40 448 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 BEGAINQ9BUH8 593 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 ING2Q9H160 280 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 GPBP1L1Q9HC44 474 aaPredicted RBP21.53■■□□□ 1.04
UPF3A-201ENST00000351487 HPS4Q9NQG7 708 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 FAM118AQ9NWS6 357 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 SLCO3A1Q9UIG8 710 aa21.53■■□□□ 1.04
UPF3A-201ENST00000351487 CLGNO14967 610 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 PABPC1P11940 636 aaKnown RBP21.52■■□□□ 1.04
UPF3A-201ENST00000351487 JUNBP17275 347 aaPredicted RBP21.52■■□□□ 1.04
UPF3A-201ENST00000351487 AMD1P17707 334 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 EMP3P54852 163 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 ZNF33BQ06732 778 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 LRRC73Q5JTD7 316 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 SERPINA13PQ6UXR4 307 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 GDPD4Q6W3E5 623 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 Q6ZVU0 165 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 ELMOD1Q8N336 334 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 OR5K1Q8NHB7 308 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 MCOLN3Q8TDD5 553 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 CSGALNACT1Q8TDX6 532 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 PYCR2Q96C36 320 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 CD84Q9UIB8 345 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 SLC22A14Q9Y267 594 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 DOCK6Q96HP0 2047 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 H3BMQ9 156 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 UGDHO60701 494 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 MNX1P50219 401 aaPredicted RBP21.52■■□□□ 1.04
UPF3A-201ENST00000351487 MTAPQ13126 283 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 C1orf53Q5VUE5 145 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 BRAT1Q6PJG6 821 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 TMEM25Q86YD3 366 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 NETO1Q8TDF5 533 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 COG8Q96MW5 612 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 SMURF2Q9HAU4 748 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 ASAH2Q9NR71 780 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 TMEM9Q9P0T7 183 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 CCL26Q9Y258 94 aa21.52■■□□□ 1.04
UPF3A-201ENST00000351487 GNGT2O14610 69 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 SGTAO43765 313 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 SERPINA1P01009 418 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 JUPP14923 745 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 CA8P35219 290 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 CDKN2CP42773 168 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 GRSF1Q12849 480 aaKnown RBP eCLIP21.51■■□□□ 1.03
UPF3A-201ENST00000351487 LAPTM5Q13571 262 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 KCNC3Q14003 757 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 DPY19L1Q2PZI1 675 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 EID3Q8N140 333 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 HDAC2Q92769 488 aaKnown RBP21.51■■□□□ 1.03
UPF3A-201ENST00000351487 FBXL8Q96CD0 374 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 CORO1BQ9BR76 489 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 AMBRA1Q9C0C7 1298 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 CFAP99D6REC4 459 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 FGF18O76093 207 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 AP2A2O94973 939 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 CRHBPP24387 322 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 DCTP40126 519 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 PFN3P60673 137 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 WDR5P61964 334 aaKnown RBP21.51■■□□□ 1.03
UPF3A-201ENST00000351487 BROXQ5VW32 411 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 CHST15Q7LFX5 561 aaPredicted RBP21.51■■□□□ 1.03
UPF3A-201ENST00000351487 CYP2U1Q7Z449 544 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 ANKRD46Q86W74 232 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 HS3ST5Q8IZT8 346 aa21.51■■□□□ 1.03
UPF3A-201ENST00000351487 OR13F1Q8NGS4 319 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms