RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 NUSAP1Q9BXS6 441 aaKnown RBP13.53□□□□□ -0.24
TRIM4-201ENST00000349062 ACPTQ9BZG2 426 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 OSGEPL1Q9H4B0 414 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 IKZF5Q9H5V7 419 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 TIMMDC1Q9NPL8 285 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 UTS2RQ9UKP6 389 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 CYP2A7P20853 494 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 VIPR1P32241 457 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 RPL26P61254 145 aaKnown RBP13.53□□□□□ -0.24
TRIM4-201ENST00000349062 TMEM115Q12893 351 aaPredicted RBP13.53□□□□□ -0.24
TRIM4-201ENST00000349062 PCBP2Q15366 365 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRIM4-201ENST00000349062 OR4F3Q6IEY1 312 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 ERAP2Q6P179 960 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 RBM12BQ8IXT5 1001 aaKnown RBP13.53□□□□□ -0.24
TRIM4-201ENST00000349062 TMEM102Q8N9M5 508 aaPredicted RBP13.53□□□□□ -0.24
TRIM4-201ENST00000349062 INPP5KQ9BT40 448 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 ACTL8Q9H568 366 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 RPF2Q9H7B2 306 aaKnown RBP13.53□□□□□ -0.24
TRIM4-201ENST00000349062 SLC6A13Q9NSD5 602 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 SELENONQ9NZV5 590 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 TBC1D14Q9P2M4 693 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 INVSQ9Y283 1065 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 FAM234BA2RU67 622 aa13.52□□□□□ -0.24
TRIM4-201ENST00000349062 J3QRK9 145 aa13.52□□□□□ -0.24
TRIM4-201ENST00000349062 SLC16A8O95907 504 aa13.52□□□□□ -0.24
TRIM4-201ENST00000349062 SERPIND1P05546 499 aa13.52□□□□□ -0.24
TRIM4-201ENST00000349062 BCKDHAP12694 445 aa13.52□□□□□ -0.24
TRIM4-201ENST00000349062 FASP25445 335 aa13.52□□□□□ -0.24
TRIM4-201ENST00000349062 YAP1P46937 504 aaKnown RBP13.52□□□□□ -0.24
TRIM4-201ENST00000349062 PRKCQQ04759 706 aa13.52□□□□□ -0.24
TRIM4-201ENST00000349062 XKR7Q5GH72 579 aa13.52□□□□□ -0.24
TRIM4-201ENST00000349062 FAM78AQ5JUQ0 283 aa13.52□□□□□ -0.24
TRIM4-201ENST00000349062 OGFOD2Q6N063 350 aa13.52□□□□□ -0.24
TRIM4-201ENST00000349062 ZNF621Q6ZSS3 439 aa13.52□□□□□ -0.24
TRIM4-201ENST00000349062 HS3ST5Q8IZT8 346 aa13.52□□□□□ -0.24
TRIM4-201ENST00000349062 FAM86B1Q8N7N1 296 aa13.52□□□□□ -0.24
TRIM4-201ENST00000349062 ASZ1Q8WWH4 475 aa13.52□□□□□ -0.24
TRIM4-201ENST00000349062 SLC13A3Q8WWT9 602 aa13.52□□□□□ -0.24
TRIM4-201ENST00000349062 FBXL8Q96CD0 374 aa13.52□□□□□ -0.24
TRIM4-201ENST00000349062 SLC32A1Q9H598 525 aa13.52□□□□□ -0.24
TRIM4-201ENST00000349062 GNG14A0A1W2PPG7 69 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 E7EQ34 232 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 EI24O14681 340 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 RECQL5O94762 991 aaPredicted RBP13.52□□□□□ -0.25
TRIM4-201ENST00000349062 DIRAS1O95057 198 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 ZNF682O95780 498 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 MAT2AP31153 395 aaKnown RBP13.52□□□□□ -0.25
TRIM4-201ENST00000349062 CYP4F2P78329 520 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 ZNF77Q15935 545 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 PPP3R2Q96LZ3 170 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 CGREF1Q99674 301 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 RETREG1Q9H6L5 497 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 SH3BP4Q9P0V3 963 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 SH3GLB1Q9Y371 365 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 BBIP1A8MTZ0 92 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 H6PDO95479 791 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 NR4A1P22736 598 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 AOAHP28039 575 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 SLC7A1P30825 629 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 EMP3P54852 163 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 STK32CQ86UX6 486 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 CHPFQ8IZ52 775 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 PDPRQ8NCN5 879 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 OR7A2PQ8NGA2 310 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 CLP1Q92989 425 aaKnown RBP13.52□□□□□ -0.25
TRIM4-201ENST00000349062 FBXL20Q96IG2 436 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 KXD1Q9BQD3 176 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 RBM38Q9H0Z9 239 aaKnown RBP13.52□□□□□ -0.25
TRIM4-201ENST00000349062 LTB4R2Q9NPC1 389 aa13.52□□□□□ -0.25
TRIM4-201ENST00000349062 A0A0C4DFX4 3053 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 ARHGEF33A8MVX0 844 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 KLK8O60259 260 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 KCNH1O95259 989 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 PCCBP05166 539 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 PGRP06401 933 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 S100A3P33764 101 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 ZNF805Q5CZA5 627 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 ANKRD34AQ69YU3 496 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 SYT12Q8IV01 421 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 FAM217AQ8IXS0 508 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 FGF13Q92913 245 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 BIRC7Q96CA5 298 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 TRIM15Q9C019 465 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 ZNF696Q9H7X3 374 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 HEPACAM2A8MVW5 462 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 E2F6O75461 281 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 TPD52P55327 224 aaPredicted RBP13.51□□□□□ -0.25
TRIM4-201ENST00000349062 HTRA4P83105 476 aaPredicted RBP13.51□□□□□ -0.25
TRIM4-201ENST00000349062 EMX2Q04743 252 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 C2orf27AQ580R0 203 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 LDLRAP1Q5SW96 308 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 BRAT1Q6PJG6 821 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 LIPIQ6XZB0 460 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 ZFAND4Q86XD8 727 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 SNX19Q92543 992 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 ZNF641Q96N77 438 aaPredicted RBP13.51□□□□□ -0.25
TRIM4-201ENST00000349062 CHID1Q9BWS9 393 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 DNAJC11Q9NVH1 559 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 C1orf109Q9NX04 203 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 GPRC5BQ9NZH0 403 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms