RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 CYP2A13Q16696 494 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 CCSMST1Q4G0I0 132 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.51■□□□□ 0.55
SYNE4-202ENST00000340477 PAQR3Q6TCH7 311 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 CYS1Q717R9 158 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 VASH2Q86V25 355 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 ZC3HC1Q86WB0 502 aaKnown RBP18.51■□□□□ 0.55
SYNE4-202ENST00000340477 GPR135Q8IZ08 494 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 MCOLN3Q8TDD5 553 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 EEF1AKMT1Q8WVE0 214 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 IFT81Q8WYA0 676 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 SMPDL3AQ92484 453 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 ZNF501Q96CX3 271 aaPredicted RBP18.51■□□□□ 0.55
SYNE4-202ENST00000340477 CPNE1Q99829 537 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 CHRNA10Q9GZZ6 450 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 GPN2Q9H9Y4 310 aaPredicted RBP18.51■□□□□ 0.55
SYNE4-202ENST00000340477 CPNE5Q9HCH3 593 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 PSAT1Q9Y617 370 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 LAMA5O15230 3695 aa18.51■□□□□ 0.55
SYNE4-202ENST00000340477 SNRNP200O75643 2136 aaKnown RBP18.5■□□□□ 0.55
SYNE4-202ENST00000340477 PTPRQQ9UMZ3 2332 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 SLC16A5O15375 505 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 KRT37O76014 449 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 CCNDBP1O95273 360 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 HIST1H2AGP0C0S8 130 aaPredicted RBP18.5■□□□□ 0.55
SYNE4-202ENST00000340477 HIST1H2ADP20671 130 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 PHBP35232 272 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 PNLIPRP1P54315 467 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 ITGA1P56199 1179 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 ABHD18Q0P651 414 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 NAB1Q13506 487 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 PWWP2BQ6NUJ5 590 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 GPR155Q7Z3F1 870 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 SYTL1Q8IYJ3 562 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 GALNT6Q8NCL4 622 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 DENND1AQ8TEH3 1009 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 TSPAN17Q96FV3 270 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 HIST1H2AHQ96KK5 128 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 FMO2Q99518 471 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 PKP4Q99569 1192 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 HIST1H2AJQ99878 128 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 H2AFJQ9BTM1 129 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 TRIM54Q9BYV2 358 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 ZDHHC18Q9NUE0 388 aa18.5■□□□□ 0.55
SYNE4-202ENST00000340477 ZFHX4Q86UP3 3567 aa18.49■□□□□ 0.55
SYNE4-202ENST00000340477 E7EQ34 232 aa18.49■□□□□ 0.55
SYNE4-202ENST00000340477 GFYI3L273 518 aa18.49■□□□□ 0.55
SYNE4-202ENST00000340477 ZNF28P17035 718 aa18.49■□□□□ 0.55
SYNE4-202ENST00000340477 MAGP20916 626 aa18.49■□□□□ 0.55
SYNE4-202ENST00000340477 CMPK1P30085 196 aa18.49■□□□□ 0.55
SYNE4-202ENST00000340477 GP5P40197 560 aa18.49■□□□□ 0.55
SYNE4-202ENST00000340477 ARHGAP40Q5TG30 622 aa18.49■□□□□ 0.55
SYNE4-202ENST00000340477 CDHR3Q6ZTQ4 885 aa18.49■□□□□ 0.55
SYNE4-202ENST00000340477 LMNTD1Q8N9Z9 388 aa18.49■□□□□ 0.55
SYNE4-202ENST00000340477 FLVCR1-AS1Q8TAF5 88 aa18.49■□□□□ 0.55
SYNE4-202ENST00000340477 TWSG1Q9GZX9 223 aa18.49■□□□□ 0.55
SYNE4-202ENST00000340477 PRORYQ9H606 182 aa18.49■□□□□ 0.55
SYNE4-202ENST00000340477 UTP6Q9NYH9 597 aaKnown RBP18.49■□□□□ 0.55
SYNE4-202ENST00000340477 PLCL2Q9UPR0 1127 aa18.49■□□□□ 0.55
SYNE4-202ENST00000340477 SSUH2Q9Y2M2 353 aa18.49■□□□□ 0.55
SYNE4-202ENST00000340477 PCDHB3Q9Y5E6 796 aa18.49■□□□□ 0.55
SYNE4-202ENST00000340477 KRT87PA6NCN2 255 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 FAM159BA6NKW6 160 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 SLC16A8O95907 504 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 HBQ1P09105 142 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 ERGP11308 486 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 STAT5AP42229 794 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 GPX6P59796 221 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 POU4F1Q01851 419 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 ZC3H12BQ5HYM0 836 aaKnown RBP18.48■□□□□ 0.55
SYNE4-202ENST00000340477 THEMIS2Q5TEJ8 643 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 CYHR1Q6ZMK1 362 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 NKAPQ8N5F7 415 aaKnown RBP18.48■□□□□ 0.55
SYNE4-202ENST00000340477 CLIP3Q96DZ5 547 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 CCDC138Q96M89 665 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 OLFM1Q99784 485 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 MIPEPQ99797 713 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 SPRY4Q9C004 299 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 PARVBQ9HBI1 364 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 POPDC3Q9HBV1 291 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 LRRC4CQ9HCJ2 640 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 DMGDHQ9UI17 866 aaKnown RBP18.48■□□□□ 0.55
SYNE4-202ENST00000340477 PADI1Q9ULC6 663 aa18.48■□□□□ 0.55
SYNE4-202ENST00000340477 PCM1Q15154 2024 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 TEX51A0A1B0GUA7 166 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 K7ENP7 123 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 EFSO43281 561 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 OR2B3O76000 313 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 TIAF1O95411 115 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 NTRK1P04629 796 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 KLK3P07288 261 aaPredicted RBP18.47■□□□□ 0.55
SYNE4-202ENST00000340477 LIFP15018 202 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 ZNF37AP17032 561 aaPredicted RBP18.47■□□□□ 0.55
SYNE4-202ENST00000340477 SPRP35270 261 aaPredicted RBP18.47■□□□□ 0.55
SYNE4-202ENST00000340477 TIAL1Q01085 375 aaKnown RBP eCLIP18.47■□□□□ 0.55
SYNE4-202ENST00000340477 DEFB110Q30KQ9 67 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 KBTBD12Q3ZCT8 623 aa18.47■□□□□ 0.55
SYNE4-202ENST00000340477 INO80CQ6PI98 192 aaPredicted RBP18.47■□□□□ 0.55
SYNE4-202ENST00000340477 TIPARPQ7Z3E1 657 aaKnown RBP18.47■□□□□ 0.55
SYNE4-202ENST00000340477 IFT20Q8IY31 132 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms