RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 DBX2Q6ZNG2 339 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 SYTL1Q8IYJ3 562 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 KIAA2013Q8IYS2 634 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 ADGRF3Q8IZF5 1079 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 MCOLN3Q8TDD5 553 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 CDK15Q96Q40 435 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 GATA5Q9BWX5 397 aaPredicted RBP15.98■□□□□ 0.15
SHOX-201ENST00000334060 POT1Q9NUX5 634 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 PADI4Q9UM07 663 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 SLC22A14Q9Y267 594 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 PTPRZ1P23471 2315 aaPredicted RBP15.98■□□□□ 0.15
SHOX-201ENST00000334060 OR6C74A6NCV1 312 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 UBFD1O14562 309 aaKnown RBP15.98■□□□□ 0.15
SHOX-201ENST00000334060 SLC16A5O15375 505 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 CHRNGP07510 517 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 MYL2P10916 166 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 FASLGP48023 281 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 GFERP55789 205 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 AMZ1Q400G9 498 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 CCDC153Q494R4 210 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 ZCCHC8Q6NZY4 707 aaKnown RBP15.98■□□□□ 0.15
SHOX-201ENST00000334060 FLVCR1-AS1Q8TAF5 88 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 LCN9Q8WX39 176 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 RAD51AP1Q96B01 352 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 SPNS1Q9H2V7 528 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 TMEM9BQ9NQ34 198 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 OXSMQ9NWU1 459 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 WWOXQ9NZC7 414 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 NUDT4Q9NZJ9 180 aa15.98■□□□□ 0.15
SHOX-201ENST00000334060 ATXN7L1Q9ULK2 861 aaPredicted RBP15.98■□□□□ 0.15
SHOX-201ENST00000334060 E2F3O00716 465 aa15.97■□□□□ 0.15
SHOX-201ENST00000334060 CCNT2O60583 730 aaKnown RBP15.97■□□□□ 0.15
SHOX-201ENST00000334060 ZWINTO95229 277 aa15.97■□□□□ 0.15
SHOX-201ENST00000334060 ERGP11308 486 aa15.97■□□□□ 0.15
SHOX-201ENST00000334060 PVRP15151 417 aa15.97■□□□□ 0.15
SHOX-201ENST00000334060 CSF2RBP32927 897 aa15.97■□□□□ 0.15
SHOX-201ENST00000334060 SLC6A12P48065 614 aa15.97■□□□□ 0.15
SHOX-201ENST00000334060 PNLIPRP1P54315 467 aa15.97■□□□□ 0.15
SHOX-201ENST00000334060 ILF2Q12905 390 aaKnown RBP15.97■□□□□ 0.15
SHOX-201ENST00000334060 SETDB1Q15047 1291 aa15.97■□□□□ 0.15
SHOX-201ENST00000334060 ADNP2Q6IQ32 1131 aa15.97■□□□□ 0.15
SHOX-201ENST00000334060 USP53Q70EK8 1073 aa15.97■□□□□ 0.15
SHOX-201ENST00000334060 SLC9B2Q86UD5 537 aa15.97■□□□□ 0.15
SHOX-201ENST00000334060 CCNYL1Q8N7R7 359 aa15.97■□□□□ 0.15
SHOX-201ENST00000334060 OR52B6Q8NGF0 335 aa15.97■□□□□ 0.15
SHOX-201ENST00000334060 RHBDD1Q8TEB9 315 aa15.97■□□□□ 0.15
SHOX-201ENST00000334060 RNF31Q96EP0 1072 aa15.97■□□□□ 0.15
SHOX-201ENST00000334060 MVB12BQ9H7P6 319 aa15.97■□□□□ 0.15
SHOX-201ENST00000334060 SEMA4BQ9NPR2 832 aaPredicted RBP15.97■□□□□ 0.15
SHOX-201ENST00000334060 CUEDC1Q9NWM3 386 aaPredicted RBP15.97■□□□□ 0.15
SHOX-201ENST00000334060 ZNF225Q9UK10 706 aa15.97■□□□□ 0.15
SHOX-201ENST00000334060 CELSR3Q9NYQ7 3312 aa15.97■□□□□ 0.15
SHOX-201ENST00000334060 TM9SF1O15321 606 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 IPO13O94829 963 aaKnown RBP15.96■□□□□ 0.15
SHOX-201ENST00000334060 ATP5F1P24539 256 aaPredicted RBP15.96■□□□□ 0.15
SHOX-201ENST00000334060 MEF2AQ02078 507 aaPredicted RBP15.96■□□□□ 0.15
SHOX-201ENST00000334060 CHI3L2Q15782 390 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 CCDC157Q569K6 752 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 ZNF678Q5SXM1 525 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 AMIGO1Q86WK6 493 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 SDR16C5Q8N3Y7 309 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 FBXO15Q8NCQ5 510 aaPredicted RBP15.96■□□□□ 0.15
SHOX-201ENST00000334060 FBXL8Q96CD0 374 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 GSTO2Q9H4Y5 243 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 ACTR5Q9H9F9 607 aaPredicted RBP15.96■□□□□ 0.15
SHOX-201ENST00000334060 TAC3Q9UHF0 121 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 IGKV1-8A0A0C4DH67 115 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 A0A1W2PQM1 296 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 H0YHG0 523 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 CBFA2T3O75081 653 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 WDR47O94967 919 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 ANXA5P08758 320 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 HIST1H2AGP0C0S8 130 aaPredicted RBP15.96■□□□□ 0.15
SHOX-201ENST00000334060 HIST1H2ADP20671 130 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 RAB28P51157 221 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 PRKAA2P54646 552 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 SF3A3Q12874 501 aaKnown RBP eCLIP15.96■□□□□ 0.15
SHOX-201ENST00000334060 STPG1Q5TH74 334 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 HHATQ5VTY9 493 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 LSMEM2Q8N112 164 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 AGR3Q8TD06 166 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 HIST1H2AHQ96KK5 128 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 CCDC138Q96M89 665 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 MIPEPQ99797 713 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 HIST1H2AJQ99878 128 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 H2AFJQ9BTM1 129 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 SRMSQ9H3Y6 488 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 KLHL3Q9UH77 587 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 PCTPQ9UKL6 214 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 COLEC10Q9Y6Z7 277 aa15.96■□□□□ 0.15
SHOX-201ENST00000334060 TMEM233B4DJY2 109 aa15.95■□□□□ 0.14
SHOX-201ENST00000334060 DFNA5O60443 496 aa15.95■□□□□ 0.14
SHOX-201ENST00000334060 RPS17P08708 135 aaKnown RBP15.95■□□□□ 0.14
SHOX-201ENST00000334060 CHRM5P08912 532 aaPredicted RBP15.95■□□□□ 0.14
SHOX-201ENST00000334060 ENO2P09104 434 aaPredicted RBP15.95■□□□□ 0.14
SHOX-201ENST00000334060 CD22P20273 847 aa15.95■□□□□ 0.14
SHOX-201ENST00000334060 ALDH18A1P54886 795 aaKnown RBP15.95■□□□□ 0.14
SHOX-201ENST00000334060 CYP2A13Q16696 494 aa15.95■□□□□ 0.14
SHOX-201ENST00000334060 CATSPEREQ5SY80 951 aa15.95■□□□□ 0.14
SHOX-201ENST00000334060 EFL1Q7Z2Z2 1120 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms