RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 UTS2RQ9UKP6 389 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 MAGED1Q9Y5V3 778 aaPredicted RBP14.17□□□□□ -0.14
TPM3-206ENST00000330188 NOTCH4Q99466 2003 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 TTC34A8MYJ7 566 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 CFAP99D6REC4 459 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 AP2A2O94973 939 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 B3GALT4O96024 378 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 ALBP02768 609 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 ASLP04424 464 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 ALPLP05186 524 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 AMD1P17707 334 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 MAPK1P28482 360 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 PTPN6P29350 595 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 ETV3P41162 512 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 ZNF77Q15935 545 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 KIAA0907Q7Z7F0 614 aaPredicted RBP14.17□□□□□ -0.14
TPM3-206ENST00000330188 FAM9CQ8IZT9 166 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 ZNF557Q8N988 423 aaPredicted RBP14.17□□□□□ -0.14
TPM3-206ENST00000330188 CYB5D2Q8WUJ1 264 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 SORCS1Q8WY21 1168 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 CLP1Q92989 425 aaKnown RBP14.17□□□□□ -0.14
TPM3-206ENST00000330188 TESCQ96BS2 214 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 FBXL8Q96CD0 374 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 AURKBQ96GD4 344 aaPredicted RBP14.17□□□□□ -0.14
TPM3-206ENST00000330188 ITCHQ96J02 903 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 HHIPQ96QV1 700 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 ATG10Q9H0Y0 220 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 TMED5Q9Y3A6 229 aa14.17□□□□□ -0.14
TPM3-206ENST00000330188 MKI67P46013 3256 aaKnown RBP14.16□□□□□ -0.14
TPM3-206ENST00000330188 TSPAN11A1L157 253 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 C16orf96A6NNT2 1141 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 FADS2P1A8MWK0 482 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 TRMUO75648 421 aaKnown RBP14.16□□□□□ -0.14
TPM3-206ENST00000330188 RETP07949 1114 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 RHOP08100 348 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 JUPP14923 745 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 TIMP2P16035 220 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 POLR2EP19388 210 aaKnown RBP14.16□□□□□ -0.14
TPM3-206ENST00000330188 HALP42357 657 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 HTRA4P83105 476 aaPredicted RBP14.16□□□□□ -0.14
TPM3-206ENST00000330188 CHIT1Q13231 466 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 PLCL1Q15111 1095 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 PON2Q15165 354 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 TMEM259Q4ZIN3 620 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 ARSIQ5FYB1 569 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 ZNF648Q5T619 568 aaPredicted RBP14.16□□□□□ -0.14
TPM3-206ENST00000330188 HENMT1Q5T8I9 393 aaKnown RBP14.16□□□□□ -0.14
TPM3-206ENST00000330188 PLPP4Q5VZY2 271 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 FRG2Q64ET8 278 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 CYP2U1Q7Z449 544 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 STK32CQ86UX6 486 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 TMEM132CQ8N3T6 1108 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 RNF175Q8N4F7 328 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 TRAM1L1Q8N609 369 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 NAT16Q8N8M0 369 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 DDHD1Q8NEL9 900 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 ASZ1Q8WWH4 475 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 HIC2Q96JB3 615 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 EGLN2Q96KS0 407 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 FRG2BQ96QU4 278 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 RIOK2Q9BVS4 552 aaKnown RBP14.16□□□□□ -0.14
TPM3-206ENST00000330188 RMND5AQ9H871 391 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 DCAF13Q9NV06 445 aaKnown RBP14.16□□□□□ -0.14
TPM3-206ENST00000330188 DDX18Q9NVP1 670 aaKnown RBP14.16□□□□□ -0.14
TPM3-206ENST00000330188 DNAJB9Q9UBS3 223 aa14.16□□□□□ -0.14
TPM3-206ENST00000330188 TMEM202A6NGA9 273 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 OR2AG2A6NM03 316 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 UPK3BL1B0FP48 263 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 UPK3BL2E5RIL1 263 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 CREG1O75629 220 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 PRKD3O94806 890 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 SLCO2B1O94956 709 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 HPRP00739 348 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 CST1P01037 141 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 FTH1P02794 183 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 GSNP06396 782 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 CTSLP07711 333 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 GSTM1P09488 218 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 THRBP10828 461 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 ACPPP15309 386 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 CDKN2CP42773 168 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 GSTM4Q03013 218 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 C11orf91Q3C1V1 193 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 ZIK1Q3SY52 487 aaPredicted RBP14.15□□□□□ -0.14
TPM3-206ENST00000330188 ARHGAP15Q53QZ3 475 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 GPR141Q7Z602 305 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 ANKRD46Q86W74 232 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 CLEC4FQ8N1N0 589 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 FAM120BQ96EK7 910 aaKnown RBP14.15□□□□□ -0.14
TPM3-206ENST00000330188 FCRL1Q96LA6 429 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 APOLD1Q96LR9 279 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 NPLQ9BXD5 320 aaPredicted RBP14.15□□□□□ -0.14
TPM3-206ENST00000330188 YTHDF1Q9BYJ9 559 aaKnown RBP14.15□□□□□ -0.14
TPM3-206ENST00000330188 GPRC5BQ9NZH0 403 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 NFKBIL1Q9UBC1 381 aaPredicted RBP14.15□□□□□ -0.14
TPM3-206ENST00000330188 IRAK3Q9Y616 596 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 A0A1B0GVG6 124 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 ARHGEF33A8MVX0 844 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 LRATO95237 230 aa14.15□□□□□ -0.14
TPM3-206ENST00000330188 FGF19O95750 216 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms