RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	S100A5	P33763	92 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	GRIN2C	Q14957	1233 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	DHCR24	Q15392	516 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	GTDC1	Q4AE62	458 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	DGKK	Q5KSL6	1271 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	NANOGP8	Q6NSW7	305 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	CHSY3	Q70JA7	882 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	PRSS58	Q8IYP2	241 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	SFRP1	Q8N474	314 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	NUDT8	Q8WV74	236 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	DUSP26	Q9BV47	211 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	TRMT61B	Q9BVS5	477 aa	Known RBP	11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	KLF16	Q9BXK1	252 aa	Predicted RBP	11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	LRRC3	Q9BY71	257 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	GSTO2	Q9H4Y5	243 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	NANOG	Q9H9S0	305 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	CLK4	Q9HAZ1	481 aa	Known RBP	11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	SOHLH2	Q9NX45	425 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	MICAL3	Q7RTP6	2002 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	DRGX	A6NNA5	263 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	TMEM189-UBE2V1	I3L0A0	370 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	CNOT3	O75175	753 aa	Known RBP	11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	CXCR2	P25025	360 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	NR1H2	P55055	460 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	RFTN2	Q52LD8	501 aa	Predicted RBP	11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	LETMD1	Q6P1Q0	360 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	BEND5	Q7L4P6	421 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	CYP4Z1	Q86W10	505 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	TCEAL8	Q8IYN2	117 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	GTPBP3	Q969Y2	492 aa	Known RBP	11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	APOL4	Q9BPW4	351 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	CD244	Q9BZW8	370 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	LIN28A	Q9H9Z2	209 aa	Known RBP	11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	FZD3	Q9NPG1	666 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	UBAP1	Q9NZ09	502 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	RPS6KA6	Q9UK32	745 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	PRSS21	Q9Y6M0	314 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771		A0A1W2PP55	124 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	CLIC1	O00299	241 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	GMFG	O60234	142 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	IFNA16	P05015	189 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	SERPINB10	P48595	397 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	DNAJB13	P59910	316 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	RPS13	P62277	151 aa	Known RBP	11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	ZDHHC21	Q8IVQ6	265 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	SLC15A3	Q8IY34	581 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	SMYD1	Q8NB12	490 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	LCN9	Q8WX39	176 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	SLC9A6	Q92581	669 aa		11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	ZFR	Q96KR1	1074 aa	Known RBP	11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	REXO4	Q9GZR2	422 aa	Known RBP	11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	SMPD3	Q9NY59	655 aa	Predicted RBP	11.54	□□□□□ -0.56
DDR1-223	ENST00000324771	RTCA	O00442	366 aa	Known RBP	11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	CAPN3	P20807	821 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	MAG	P20916	626 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	BMPR1A	P36894	532 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	IST1	P53990	364 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	RAB8A	P61006	207 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	TGM3	Q08188	693 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	LHX8	Q68G74	356 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	ENPP7	Q6UWV6	458 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	CD200R1	Q8TD46	325 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	LMLN	Q96KR4	655 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	KLHL28	Q9NXS3	571 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	IKZF3	Q9UKT9	509 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	ZDBF2	Q9HCK1	2354 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	ENG	P17813	658 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	ARNT	P27540	789 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	SLC7A1	P30825	629 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	CDH12	P55289	794 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	ZXDB	P98169	803 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	RHD	Q02161	417 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	GANAB	Q14697	944 aa	Known RBP	11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	INTS11	Q5TA45	600 aa	Known RBP	11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	GPR153	Q6NV75	609 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	TRIM40	Q6P9F5	258 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	CASP12	Q6UXS9	341 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	PAGE2	Q7Z2X7	111 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	C16orf62	Q7Z3J2	963 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	ZNF605	Q86T29	641 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	C1orf21	Q9H246	121 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	SBF2	Q86WG5	1849 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	LOC285095	A0A1B0GVY8	99 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	HEPACAM2	A8MVW5	462 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	HNRNPCL2	B2RXH8	293 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771		H7BY64	318 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	RFXAP	O00287	272 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	RUNX1T1	Q06455	604 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	ADRM1	Q16186	407 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	USP39	Q53GS9	565 aa	Known RBP	11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	ZDHHC20	Q5W0Z9	365 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	MAVS	Q7Z434	540 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	PROSER1	Q86XN7	944 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	MFSD6L	Q8IWD5	586 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	KIAA2013	Q8IYS2	634 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	TCAIM	Q8N3R3	496 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	ABHD8	Q96I13	439 aa		11.53	□□□□□ -0.56
DDR1-223	ENST00000324771	FBXL20	Q96IG2	436 aa		11.53	□□□□□ -0.56

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