RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 RGS7P49802 495 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 RPL14P50914 215 aaKnown RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 KPNA2P52292 529 aaKnown RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 FOLH1Q04609 750 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 TRAP1Q12931 704 aaKnown RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 BIRC2Q13490 618 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 CYLC2Q14093 348 aaPredicted RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 DPYSQ14117 519 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 MAPRE2Q15555 327 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 SF1Q15637 639 aaKnown RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 TRIP10Q15642 601 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 UGP2Q16851 508 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 CDO1Q16878 200 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 PLEKHG6Q3KR16 790 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 SFT2D3Q587I9 215 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 PPP6R3Q5H9R7 873 aaPredicted RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 LIPMQ5VYY2 423 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 ITPRIPL1Q6GPH6 555 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 CASC4Q6P4E1 433 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 ZYG11AQ6WRX3 759 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 B3GNT6Q6ZMB0 384 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 Q6ZSN1 163 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 ZCCHC23Q6ZST2 131 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 FRMD7Q6ZUT3 714 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 RAPH1Q70E73 1250 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 GPRIN1Q7Z2K8 1008 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 GLRX5Q86SX6 157 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 LINC00523Q86TU6 105 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 ZNF227Q86WZ6 799 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 NAXDQ8IW45 347 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 TRIM48Q8IWZ4 208 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 RBM12BQ8IXT5 1001 aaKnown RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 PGAM4Q8N0Y7 254 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 NUP93Q8N1F7 819 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 HDDC3Q8N4P3 179 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 B3GALNT2Q8NCR0 500 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 CEP76Q8TAP6 659 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 PYDC1Q8WXC3 89 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 KCTD13Q8WZ19 329 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 DNASE2BQ8WZ79 361 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 PGAP3Q96FM1 320 aaPredicted RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 PIWIL1Q96J94 861 aaKnown RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 FAR2Q96K12 515 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 TNIP3Q96KP6 325 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 MRGPRX1Q96LB2 322 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 CEP295NLQ96MC4 621 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 PRICKLE1Q96MT3 831 aaPredicted RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 TSNARE1Q96NA8 513 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 SLC2A13Q96QE2 648 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 AGAP2Q99490 1192 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 NDNQ99608 321 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 GPR22Q99680 433 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 SMOQ99835 787 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 GABRG3Q99928 467 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 JAM3Q9BX67 310 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 IL22Q9GZX6 179 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 DRC3Q9H069 523 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 ZNF385DQ9H6B1 395 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 COG4Q9H9E3 785 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 EFCAB1Q9HAE3 211 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 NMUR1Q9HB89 426 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 NMRAL1Q9HBL8 299 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 TCF7L2Q9NQB0 619 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 SPHK2Q9NRA0 654 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 SNX15Q9NRS6 342 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 PNPOQ9NVS9 261 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 TMEM216Q9P0N5 145 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 MARCOQ9UEW3 520 aaPredicted RBP4.82□□□□□ -1.64
CKS1B-201ENST00000308987 CLEC4EQ9ULY5 219 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 STAP1Q9ULZ2 295 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 GMEB1Q9Y692 573 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 RPS6KL1Q9Y6S9 549 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 TEX15Q9BXT5 2789 aa4.82□□□□□ -1.64
CKS1B-201ENST00000308987 TRPM6Q9BX84 2022 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 A0A096LPK6 155 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 C15orf38-AP3S2A0A0A6YYH1 394 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 ZCWPW2A0A1B0GU75 182 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 FAM149AA5PLN7 773 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 EIF4E1BA6NMX2 242 aaKnown RBP4.81□□□□□ -1.64
CKS1B-201ENST00000308987 HHLA1C9JL84 531 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 TRIM38O00635 465 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 ZBTB14O43829 449 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 TLR5O60602 858 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 GRAP2O75791 330 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 TMCC1O94876 653 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 CLPTM1O96005 669 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 KLKB1P03952 638 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 C2P06681 752 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 TYRP14679 529 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 GOT1P17174 413 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 TFEBP19484 476 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 ME2P23368 584 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 PIK3R1P27986 724 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 PEX2P28328 305 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 ARRB2P32121 409 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 HTR7P34969 479 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 GRIA1P42261 906 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 IL12RB1P42701 662 aa4.81□□□□□ -1.64
CKS1B-201ENST00000308987 PPP3CCP48454 512 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms