RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 C19orf18Q8NEA5 215 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 RPL3LQ92901 407 aaKnown RBP12.99□□□□□ -0.33
CASC4-201ENST00000299957 PPCDCQ96CD2 204 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 NUSAP1Q9BXS6 441 aaKnown RBP12.99□□□□□ -0.33
CASC4-201ENST00000299957 SEZ6LQ9BYH1 1024 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 ANKRD60Q9BZ19 345 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 OR51B5Q9H339 312 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 KAT8Q9H7Z6 458 aaKnown RBP12.99□□□□□ -0.33
CASC4-201ENST00000299957 DUS2Q9NX74 493 aaKnown RBP12.99□□□□□ -0.33
CASC4-201ENST00000299957 KCTD5Q9NXV2 234 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 SCML2Q9UQR0 700 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 PAPPAQ13219 1627 aa12.99□□□□□ -0.33
CASC4-201ENST00000299957 SH3PXD2BA1X283 911 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 PSIP1O75475 530 aaKnown RBP12.98□□□□□ -0.33
CASC4-201ENST00000299957 BLVRAP53004 296 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 PLA2G16P53816 162 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 TIGD6Q17RP2 521 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 PABPC1LQ4VXU2 614 aaKnown RBP12.98□□□□□ -0.33
CASC4-201ENST00000299957 OR2T5Q6IEZ7 315 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 KLHL17Q6TDP4 642 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 AKAP14Q86UN6 197 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 ARMC8Q8IUR7 673 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 EPHX4Q8IUS5 362 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 MINDY1Q8N5J2 469 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 MDGA1Q8NFP4 955 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 OR2T29Q8NH02 315 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 OR5K1Q8NHB7 308 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 CYB5D2Q8WUJ1 264 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 BBS4Q96RK4 519 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 TUBB1Q9H4B7 451 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 MTG2Q9H4K7 406 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 RMI1Q9H9A7 625 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 PCTPQ9UKL6 214 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 ACSL6Q9UKU0 697 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 ERGIC3Q9Y282 383 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 ASB1Q9Y576 335 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 CEP350Q5VT06 3117 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 NR2F1P10589 423 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 BMP2P12643 396 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 CLCN2P51788 898 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 MANFP55145 182 aaKnown RBP12.98□□□□□ -0.33
CASC4-201ENST00000299957 CBX2Q14781 532 aaPredicted RBP12.98□□□□□ -0.33
CASC4-201ENST00000299957 PGBD5Q8N414 524 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 NETO1Q8TDF5 533 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 UBE2FQ969M7 185 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 ZUFSPQ96AP4 578 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 HSH2DQ96JZ2 352 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 GPR78Q96P69 363 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 NPLQ9BXD5 320 aaPredicted RBP12.98□□□□□ -0.33
CASC4-201ENST00000299957 EMILIN2Q9BXX0 1053 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 WDR12Q9GZL7 423 aaKnown RBP12.98□□□□□ -0.33
CASC4-201ENST00000299957 ZIM2Q9NZV7 527 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 PCDHB1Q9Y5F3 818 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 COL2A1P02458 1487 aaPredicted RBP12.98□□□□□ -0.33
CASC4-201ENST00000299957 GSAPA4D1B5 854 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 CSF2P04141 144 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 PYDC2Q56P42 97 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 CERS6Q6ZMG9 384 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 Q6ZVL8 140 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 RAVER1Q8IY67 606 aaKnown RBP12.98□□□□□ -0.33
CASC4-201ENST00000299957 AADATQ8N5Z0 425 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 ANKFN1Q8N957 763 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 FAM118AQ9NWS6 357 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 UTS2RQ9UKP6 389 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 FZD4Q9ULV1 537 aa12.98□□□□□ -0.33
CASC4-201ENST00000299957 CCL16O15467 120 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 COCHO43405 550 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 ATP6AP1Q15904 470 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 TRIQKQ629K1 86 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 NEK10Q6ZWH5 1172 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 DNAJB7Q7Z6W7 309 aaPredicted RBP12.97□□□□□ -0.33
CASC4-201ENST00000299957 TRIM69Q86WT6 500 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 SORCS1Q8WY21 1168 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 CLP1Q92989 425 aaKnown RBP12.97□□□□□ -0.33
CASC4-201ENST00000299957 NLNQ9BYT8 704 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 RNF208Q9H0X6 261 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 ALPK2Q86TB3 2170 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 MCM3APO60318 1980 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 RP1P56715 2156 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 MANBAO00462 879 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 IMPDH2P12268 514 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 PTGER1P34995 402 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 SLC26A3P40879 764 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 BCAP31P51572 246 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 ZNF467Q7Z7K2 595 aaPredicted RBP12.97□□□□□ -0.33
CASC4-201ENST00000299957 MYDGFQ969H8 173 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 BARD1Q99728 777 aaKnown RBP12.97□□□□□ -0.33
CASC4-201ENST00000299957 DUSP26Q9BV47 211 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 THUMPD1Q9NXG2 353 aaKnown RBP12.97□□□□□ -0.33
CASC4-201ENST00000299957 SLCO3A1Q9UIG8 710 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 SLC9A8Q9Y2E8 581 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 SEC16AO15027 2179 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 TCRBV3S1A0A5B6 114 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 PLOD3O60568 738 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 UGT2B11O75310 529 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 DNTTP04053 509 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 CKMT1AP12532 417 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 ZNF12P17014 697 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 GPR1P46091 355 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 SREBF2Q12772 1141 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms