RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 WNT1P04628 370 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 ABCB1P08183 1280 aaPredicted RBP8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 CREB1P16220 341 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 TFEBP19484 476 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 IDSP22304 550 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 GNPDA1P46926 289 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 SERPINB4P48594 390 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 PXNP49023 591 aaPredicted RBP8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 HK2P52789 917 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 HK3P52790 923 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 GALNT1Q10472 559 aaPredicted RBP8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 MPP2Q14168 576 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 PDK4Q16654 411 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 ZNF423Q2M1K9 1284 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 MINDY4Q4G0A6 757 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 PATL1Q86TB9 770 aaKnown RBP8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 CHCHD4Q8N4Q1 142 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 B4GALNT2Q8NHY0 566 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 CKAP2Q8WWK9 683 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 PTERQ96BW5 349 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 FAM111AQ96PZ2 611 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 RAB11FIP5Q9BXF6 653 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 MVB12BQ9H7P6 319 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 PARVBQ9HBI1 364 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 FGFR1OP2Q9NVK5 253 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 KIF17Q9P2E2 1029 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 SLC17A7Q9P2U7 560 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 XPR1Q9UBH6 696 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 WARS2Q9UGM6 360 aaKnown RBP8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 POLG2Q9UHN1 485 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 RNF112Q9ULX5 631 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 DYRK1BQ9Y463 629 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 CSNK1G3Q9Y6M4 447 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 FOXO6A8MYZ6 492 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 H0Y8X5 98 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 BTN3A1O00481 513 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 SHOX2O60902 331 aaPredicted RBP8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 GRK2P25098 689 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 GGT5P36269 586 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 ALDH6A1Q02252 535 aaKnown RBP8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 OR4D1Q15615 310 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 GALNTL6Q49A17 601 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 LIPMQ5VYY2 423 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 ABRAXAS1Q6UWZ7 409 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 SYT12Q8IV01 421 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 PNPLA1Q8N8W4 532 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 VPS37AQ8NEZ2 397 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 OR6Y1Q8NGX8 325 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 IPCEF1Q8WWN9 437 aaPredicted RBP8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 ATL1Q8WXF7 558 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 PDXPQ96GD0 296 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 BTBD9Q96Q07 612 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 ING2Q9H160 280 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 CARS2Q9HA77 564 aaKnown RBP8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 TNPO3Q9Y5L0 923 aaKnown RBP8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 SNX8Q9Y5X2 465 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 ANKRD65E5RJM6 399 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 HRO43593 1189 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 ZBTB14O43829 449 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 NPHS1O60500 1241 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 TPST1O60507 370 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 IPO13O94829 963 aaKnown RBP8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 ERGP11308 486 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 CPA3P15088 417 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 CTSKP43235 329 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 ACTN3Q08043 901 aaPredicted RBP8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 ELOCQ15369 112 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 DUOXA1Q1HG43 343 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 TPRG1LQ5T0D9 272 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 SULT1C3Q6IMI6 304 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 TSSK4Q6SA08 328 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 TAF8Q7Z7C8 310 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 GKN2Q86XP6 184 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 SPATS2Q86XZ4 545 aaKnown RBP8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 TBC1D21Q8IYX1 336 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 STON2Q8WXE9 905 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 PPP1R14AQ96A00 147 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 UCK1Q9HA47 277 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 POLR1DQ9Y2S0 133 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 CAPN7Q9Y6W3 813 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 A6NCN8 305 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 RXRGP48443 463 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 WDR4P57081 412 aaKnown RBP8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 PCDH1Q08174 1060 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 ARHGAP19Q14CB8 494 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 PCBP2Q15366 365 aaKnown RBP eCLIP8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 PIWIL4Q7Z3Z4 852 aaKnown RBP8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 OR5K2Q8NHB8 316 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 FBXL8Q96CD0 374 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 ALG9Q9H6U8 611 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 CA5BQ9Y2D0 317 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 PCYT1BQ9Y5K3 369 aaPredicted RBP8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 TECTAO75443 2155 aa8.2□□□□□ -1.1
PTPDC1-201ENST00000288976 ANGPT2O15123 496 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 CATP04040 527 aaKnown RBP8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 FUCA1P04066 466 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 SLC35G4P0C7Q5 338 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 ALDH4A1P30038 563 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 PIK3CGP48736 1102 aa8.19□□□□□ -1.1
PTPDC1-201ENST00000288976 ILF3Q12906 894 aaKnown RBP eCLIP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms