RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 HOXC4P09017 264 aaPredicted RBP21.41■■□□□ 1.02
CCDC7-201ENST00000277657 SLC2A4P14672 509 aa21.41■■□□□ 1.02
CCDC7-201ENST00000277657 ACSL1P33121 698 aa21.41■■□□□ 1.02
CCDC7-201ENST00000277657 CASP2P42575 452 aa21.41■■□□□ 1.02
CCDC7-201ENST00000277657 MAD2L1Q13257 205 aaPredicted RBP21.41■■□□□ 1.02
CCDC7-201ENST00000277657 IMPG1Q17R60 797 aa21.41■■□□□ 1.02
CCDC7-201ENST00000277657 VPS26BQ4G0F5 336 aa21.41■■□□□ 1.02
CCDC7-201ENST00000277657 IL23RQ5VWK5 629 aa21.41■■□□□ 1.02
CCDC7-201ENST00000277657 FRG2Q64ET8 278 aa21.41■■□□□ 1.02
CCDC7-201ENST00000277657 ZFAND4Q86XD8 727 aa21.41■■□□□ 1.02
CCDC7-201ENST00000277657 EFCAB3Q8N7B9 438 aa21.41■■□□□ 1.02
CCDC7-201ENST00000277657 TFGQ92734 400 aaPredicted RBP21.41■■□□□ 1.02
CCDC7-201ENST00000277657 HLA-CQ95604 372 aa21.41■■□□□ 1.02
CCDC7-201ENST00000277657 ROPN1LQ96C74 230 aa21.41■■□□□ 1.02
CCDC7-201ENST00000277657 FRG2BQ96QU4 278 aa21.41■■□□□ 1.02
CCDC7-201ENST00000277657 LRTM1Q9HBL6 345 aa21.41■■□□□ 1.02
CCDC7-201ENST00000277657 ACSL5Q9ULC5 683 aa21.41■■□□□ 1.02
CCDC7-201ENST00000277657 POMPQ9Y244 141 aa21.41■■□□□ 1.02
CCDC7-201ENST00000277657 ANKRD28O15084 1053 aa21.4■■□□□ 1.02
CCDC7-201ENST00000277657 G6PDP11413 515 aa21.4■■□□□ 1.02
CCDC7-201ENST00000277657 PRPH2P23942 346 aa21.4■■□□□ 1.02
CCDC7-201ENST00000277657 PSME3P61289 254 aa21.4■■□□□ 1.02
CCDC7-201ENST00000277657 TBPL1P62380 186 aa21.4■■□□□ 1.02
CCDC7-201ENST00000277657 RPL38P63173 70 aaKnown RBP21.4■■□□□ 1.02
CCDC7-201ENST00000277657 DOC2AQ14183 400 aa21.4■■□□□ 1.02
CCDC7-201ENST00000277657 XKR6Q5GH73 641 aa21.4■■□□□ 1.02
CCDC7-201ENST00000277657 CAPN13Q6MZZ7 669 aaPredicted RBP21.4■■□□□ 1.02
CCDC7-201ENST00000277657 CYP20A1Q6UW02 462 aa21.4■■□□□ 1.02
CCDC7-201ENST00000277657 DCUN1D3Q8IWE4 304 aa21.4■■□□□ 1.02
CCDC7-201ENST00000277657 SYTL1Q8IYJ3 562 aa21.4■■□□□ 1.02
CCDC7-201ENST00000277657 PCYOX1LQ8NBM8 494 aa21.4■■□□□ 1.02
CCDC7-201ENST00000277657 DENND6BQ8NEG7 585 aa21.4■■□□□ 1.02
CCDC7-201ENST00000277657 RAD51AP1Q96B01 352 aa21.4■■□□□ 1.02
CCDC7-201ENST00000277657 MTFMTQ96DP5 389 aaKnown RBP21.4■■□□□ 1.02
CCDC7-201ENST00000277657 SPDL1Q96EA4 605 aa21.4■■□□□ 1.02
CCDC7-201ENST00000277657 SCARF2Q96GP6 870 aaPredicted RBP21.4■■□□□ 1.02
CCDC7-201ENST00000277657 SLC45A3Q96JT2 553 aa21.4■■□□□ 1.02
CCDC7-201ENST00000277657 ACTL8Q9H568 366 aa21.4■■□□□ 1.02
CCDC7-201ENST00000277657 C1orf109Q9NX04 203 aa21.4■■□□□ 1.02
CCDC7-201ENST00000277657 MAP10Q9P2G4 905 aa21.4■■□□□ 1.02
CCDC7-201ENST00000277657 NKX1-2Q9UD57 310 aaPredicted RBP21.4■■□□□ 1.02
CCDC7-201ENST00000277657 NDRG2Q9UN36 371 aaKnown RBP21.4■■□□□ 1.02
CCDC7-201ENST00000277657 FAM234BA2RU67 622 aa21.39■■□□□ 1.02
CCDC7-201ENST00000277657 PRR19A6NJB7 356 aa21.39■■□□□ 1.02
CCDC7-201ENST00000277657 C9JVG2 144 aa21.39■■□□□ 1.02
CCDC7-201ENST00000277657 E7ENX8 843 aa21.39■■□□□ 1.02
CCDC7-201ENST00000277657 MAN2B1O00754 1011 aa21.39■■□□□ 1.02
CCDC7-201ENST00000277657 CFLARO15519 480 aa21.39■■□□□ 1.02
CCDC7-201ENST00000277657 RSL1D1O76021 490 aaKnown RBP21.39■■□□□ 1.02
CCDC7-201ENST00000277657 GNAZP19086 355 aa21.39■■□□□ 1.02
CCDC7-201ENST00000277657 HNF4AP41235 474 aa21.39■■□□□ 1.02
CCDC7-201ENST00000277657 NEK2P51955 445 aa21.39■■□□□ 1.02
CCDC7-201ENST00000277657 TAP2Q03519 686 aa21.39■■□□□ 1.02
CCDC7-201ENST00000277657 KIAA0040Q15053 153 aa21.39■■□□□ 1.02
CCDC7-201ENST00000277657 ZNF423Q2M1K9 1284 aa21.39■■□□□ 1.02
CCDC7-201ENST00000277657 GRHL2Q6ISB3 625 aa21.39■■□□□ 1.02
CCDC7-201ENST00000277657 OR5AR1Q8NGP9 310 aa21.39■■□□□ 1.02
CCDC7-201ENST00000277657 OR2T34Q8NGX1 318 aa21.39■■□□□ 1.02
CCDC7-201ENST00000277657 BTBD1Q9H0C5 482 aa21.39■■□□□ 1.02
CCDC7-201ENST00000277657 PSMD13Q9UNM6 376 aa21.39■■□□□ 1.02
CCDC7-201ENST00000277657 POLR3HQ9Y535 204 aaPredicted RBP21.39■■□□□ 1.02
CCDC7-201ENST00000277657 KCNE2Q9Y6J6 123 aa21.39■■□□□ 1.02
CCDC7-201ENST00000277657 A0A1W2PP18 115 aa21.39■■□□□ 1.01
CCDC7-201ENST00000277657 C10orf142B7Z368 130 aa21.39■■□□□ 1.01
CCDC7-201ENST00000277657 CACNB4O00305 520 aaPredicted RBP21.39■■□□□ 1.01
CCDC7-201ENST00000277657 CLGNO14967 610 aa21.39■■□□□ 1.01
CCDC7-201ENST00000277657 ANGPT2O15123 496 aa21.39■■□□□ 1.01
CCDC7-201ENST00000277657 KELP23276 732 aa21.39■■□□□ 1.01
CCDC7-201ENST00000277657 IL12AP29459 219 aa21.39■■□□□ 1.01
CCDC7-201ENST00000277657 POLR2JP52435 117 aaKnown RBP21.39■■□□□ 1.01
CCDC7-201ENST00000277657 THOP1P52888 689 aa21.39■■□□□ 1.01
CCDC7-201ENST00000277657 PNLIPRP1P54315 467 aa21.39■■□□□ 1.01
CCDC7-201ENST00000277657 KCNK10P57789 538 aa21.39■■□□□ 1.01
CCDC7-201ENST00000277657 CEACAM7Q14002 265 aa21.39■■□□□ 1.01
CCDC7-201ENST00000277657 MLF2Q15773 248 aaPredicted RBP21.39■■□□□ 1.01
CCDC7-201ENST00000277657 LEXMQ3ZCV2 418 aa21.39■■□□□ 1.01
CCDC7-201ENST00000277657 PYCR3Q53H96 274 aa21.39■■□□□ 1.01
CCDC7-201ENST00000277657 CAPRIN2Q6IMN6 1127 aaKnown RBP21.39■■□□□ 1.01
CCDC7-201ENST00000277657 CHST15Q7LFX5 561 aaPredicted RBP21.39■■□□□ 1.01
CCDC7-201ENST00000277657 ZNF687Q8N1G0 1237 aa21.39■■□□□ 1.01
CCDC7-201ENST00000277657 OR5K2Q8NHB8 316 aa21.39■■□□□ 1.01
CCDC7-201ENST00000277657 WDR20Q8TBZ3 569 aa21.39■■□□□ 1.01
CCDC7-201ENST00000277657 CCDC124Q96CT7 223 aaKnown RBP21.39■■□□□ 1.01
CCDC7-201ENST00000277657 EIF3LQ9Y262 564 aaKnown RBP21.39■■□□□ 1.01
CCDC7-201ENST00000277657 H0YIV9 168 aa21.38■■□□□ 1.01
CCDC7-201ENST00000277657 IFRD1O00458 451 aaPredicted RBP21.38■■□□□ 1.01
CCDC7-201ENST00000277657 KCNJ13O60928 360 aa21.38■■□□□ 1.01
CCDC7-201ENST00000277657 SEC22BO75396 215 aa21.38■■□□□ 1.01
CCDC7-201ENST00000277657 PSMG1O95456 288 aa21.38■■□□□ 1.01
CCDC7-201ENST00000277657 RPN2P04844 631 aa21.38■■□□□ 1.01
CCDC7-201ENST00000277657 ACP5P13686 325 aa21.38■■□□□ 1.01
CCDC7-201ENST00000277657 NPPBP16860 134 aa21.38■■□□□ 1.01
CCDC7-201ENST00000277657 JAK1P23458 1154 aa21.38■■□□□ 1.01
CCDC7-201ENST00000277657 KIAA1024LP59773 190 aa21.38■■□□□ 1.01
CCDC7-201ENST00000277657 SLCO4C1Q6ZQN7 724 aa21.38■■□□□ 1.01
CCDC7-201ENST00000277657 Q6ZS52 159 aa21.38■■□□□ 1.01
CCDC7-201ENST00000277657 PHC3Q8NDX5 983 aa21.38■■□□□ 1.01
CCDC7-201ENST00000277657 NEIL2Q969S2 332 aa21.38■■□□□ 1.01
CCDC7-201ENST00000277657 USP36Q9P275 1121 aaKnown RBP21.38■■□□□ 1.01
CCDC7-201ENST00000277657 CROTQ9UKG9 612 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms