RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 TUBA1AQ71U36 451 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 LAX1Q8IWV1 398 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 ST13P5Q8NFI4 369 aaPredicted RBP12.53□□□□□ -0.4
HERC6-202ENST00000273960 PPTC7Q8NI37 304 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 RHBDF1Q96CC6 855 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 DUSP21Q9H596 190 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 TMPRSS11EQ9UL52 423 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 DNAJC25-GNG10A0A024R161 153 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 IQCF5A8MTL0 148 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 EPN2O95208 641 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 S1PR4O95977 384 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 CYP2A6P11509 494 aaPredicted RBP12.53□□□□□ -0.4
HERC6-202ENST00000273960 GLULP15104 373 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 ZNF250P15622 560 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 TNFRSF1BP20333 461 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 SOX6P35712 828 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 HNF4AP41235 474 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 PIK3CBP42338 1070 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 ZNF45Q02386 682 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 MAD2L1BPQ15013 274 aaPredicted RBP12.53□□□□□ -0.4
HERC6-202ENST00000273960 ZMYND11Q15326 602 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 SLX4IPQ5VYV7 408 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 NOTUMQ6P988 496 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 FAM131AQ6UXB0 335 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 CCDC71Q8IV32 467 aaPredicted RBP12.53□□□□□ -0.4
HERC6-202ENST00000273960 LSMEM1Q8N8F7 131 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 GRPEL2Q8TAA5 225 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 TMEM203Q969S6 136 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 TRMT61AQ96FX7 289 aaKnown RBP12.53□□□□□ -0.4
HERC6-202ENST00000273960 C16orf70Q9BSU1 422 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 UBA2Q9UBT2 640 aaPredicted RBP12.53□□□□□ -0.4
HERC6-202ENST00000273960 KCNN3Q9UGI6 736 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 LYVE1Q9Y5Y7 322 aa12.53□□□□□ -0.4
HERC6-202ENST00000273960 TANC1Q9C0D5 1861 aa12.52□□□□□ -0.4
HERC6-202ENST00000273960 ARID2Q68CP9 1835 aa12.52□□□□□ -0.4
HERC6-202ENST00000273960 CASTOR2A6NHX0 329 aa12.52□□□□□ -0.4
HERC6-202ENST00000273960 WWP2O00308 870 aa12.52□□□□□ -0.4
HERC6-202ENST00000273960 ERN1O75460 977 aaKnown RBP12.52□□□□□ -0.4
HERC6-202ENST00000273960 NTRK1P04629 796 aa12.52□□□□□ -0.4
HERC6-202ENST00000273960 SLC2A3P11169 496 aa12.52□□□□□ -0.4
HERC6-202ENST00000273960 RFX2P48378 723 aa12.52□□□□□ -0.4
HERC6-202ENST00000273960 GEMP55040 296 aa12.52□□□□□ -0.4
HERC6-202ENST00000273960 FOXM1Q08050 763 aa12.52□□□□□ -0.4
HERC6-202ENST00000273960 SEMA3AQ14563 771 aa12.52□□□□□ -0.4
HERC6-202ENST00000273960 GPAT3Q53EU6 434 aa12.52□□□□□ -0.4
HERC6-202ENST00000273960 IRAK1BP1Q5VVH5 260 aa12.52□□□□□ -0.4
HERC6-202ENST00000273960 GALNT6Q8NCL4 622 aa12.52□□□□□ -0.4
HERC6-202ENST00000273960 ZNF675Q8TD23 568 aa12.52□□□□□ -0.4
HERC6-202ENST00000273960 SDHCQ99643 169 aaPredicted RBP12.52□□□□□ -0.4
HERC6-202ENST00000273960 ACAT2Q9BWD1 397 aa12.52□□□□□ -0.4
HERC6-202ENST00000273960 FARSBQ9NSD9 589 aaKnown RBP12.52□□□□□ -0.4
HERC6-202ENST00000273960 MGAMO43451 1857 aa12.52□□□□□ -0.4
HERC6-202ENST00000273960 GPR39O43194 453 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 CKMT1AP12532 417 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 PRKACAP17612 351 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 GDF5P43026 501 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 ERVK-8P63133 956 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 STK11Q15831 433 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 DUSP28Q4G0W2 176 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 WSCD1Q658N2 575 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 KIAA0930Q6ICG6 404 aaPredicted RBP12.52□□□□□ -0.41
HERC6-202ENST00000273960 GPRIN3Q6ZVF9 776 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 ZFAND4Q86XD8 727 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 L3HYPDHQ96EM0 354 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 OR2A14Q96R47 310 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 OR5M11Q96RB7 305 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 OR52E6Q96RD3 313 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 GPR21Q99679 349 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 PTPN18Q99952 460 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 DPH2Q9BQC3 489 aaPredicted RBP12.52□□□□□ -0.41
HERC6-202ENST00000273960 ZNF224Q9NZL3 707 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 RCOR3Q9P2K3 495 aaPredicted RBP12.52□□□□□ -0.41
HERC6-202ENST00000273960 MYL9P24844 172 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 PPP3CCP48454 512 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 CDKN1CP49918 316 aaPredicted RBP12.52□□□□□ -0.41
HERC6-202ENST00000273960 SCNN1GP51170 649 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 FBXO47Q5MNV8 452 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 SMYD5Q6GMV2 418 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 Q6ZSR9 355 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 SVOPLQ8N434 492 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 B3GALNT2Q8NCR0 500 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 SIMC1Q8NDZ2 872 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 BRSK1Q8TDC3 778 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 SLC7A6Q92536 515 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 PHF21AQ96BD5 680 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 MRPL9Q9BYD2 267 aaKnown RBP12.52□□□□□ -0.41
HERC6-202ENST00000273960 CDCP1Q9H5V8 836 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 IL1RAPQ9NPH3 570 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 TREX1Q9NSU2 369 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 SIRT5Q9NXA8 310 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 SLC6A14Q9UN76 642 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 PEX16Q9Y5Y5 336 aa12.52□□□□□ -0.41
HERC6-202ENST00000273960 ZNF487B1APH4 448 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 OR2B3O76000 313 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 HPRP00739 348 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 MFSD10Q14728 455 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 FLYWCH1Q4VC44 716 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 NADSYN1Q6IA69 706 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 KLHL17Q6TDP4 642 aa12.51□□□□□ -0.41
HERC6-202ENST00000273960 CNTN4Q8IWV2 1026 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms