RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 GALPQ9UBC7 116 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 NME7Q9Y5B8 376 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 NDST3O95803 873 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 IL6P05231 212 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 CTSAP10619 480 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 HPCAL1P37235 193 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 TUBA1BP68363 451 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 HSPA14Q0VDF9 509 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 GRB7Q14451 532 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 ZNF284Q2VY69 593 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 ANKDD1AQ495B1 522 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 TUBA1AQ71U36 451 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 TMEM102Q8N9M5 508 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 GLB1L3Q8NCI6 653 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 TSPEARQ8WU66 669 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 MED8Q96G25 268 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 KCNS3Q9BQ31 491 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 LHPPQ9H008 270 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 MTMR10Q9NXD2 777 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 TOR4AQ9NXH8 423 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 VPS51Q9UID3 782 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 MRPS23Q9Y3D9 190 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 CASP8AP2Q9UKL3 1982 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 PRMT5O14744 637 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 OXSR1O95747 527 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 SLC15A1P46059 708 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 PFKPQ01813 784 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 ERICH5Q6P6B1 374 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 TPGS1Q6ZTW0 290 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 CPNE9Q8IYJ1 553 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 MFSD2AQ8NA29 543 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 APOLD1Q96LR9 279 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 OLAHQ9NV23 265 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 CPQQ9Y646 472 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 TRIP12Q14669 1992 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 TCRBV3S1A0A5B6 114 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 WASH4PA8MWX3 477 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 CCRL2O00421 344 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 RB1P06400 928 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 GPC1P35052 558 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 GSTM5P46439 218 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 ARMC12Q5T9G4 340 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 LIX1Q8N485 282 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 OR7D4Q8NG98 312 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 DIRAS2Q96HU8 199 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 CDK15Q96Q40 435 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 TTLL2Q9BWV7 592 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 CRISPLD2Q9H0B8 497 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 AGO1Q9UL18 857 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 MAPRE3Q9UPY8 281 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 RNF11Q9Y3C5 154 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 PCDHB3Q9Y5E6 796 aa11.28□□□□□ -0.6
CLSTN3-201ENST00000266546 ZNF840PA6NDX5 716 aa11.27□□□□□ -0.6
CLSTN3-201ENST00000266546 BTN3A3O00478 584 aa11.27□□□□□ -0.6
CLSTN3-201ENST00000266546 TNFRSF10BO14763 440 aa11.27□□□□□ -0.6
CLSTN3-201ENST00000266546 PRKAR1AP10644 381 aa11.27□□□□□ -0.6
CLSTN3-201ENST00000266546 GSTM2P28161 218 aa11.27□□□□□ -0.6
CLSTN3-201ENST00000266546 ZNF697Q5TEC3 545 aa11.27□□□□□ -0.6
CLSTN3-201ENST00000266546 ZNF783Q6ZMS7 281 aa11.27□□□□□ -0.6
CLSTN3-201ENST00000266546 PRR23BQ6ZRT6 265 aa11.27□□□□□ -0.6
CLSTN3-201ENST00000266546 ADCK2Q7Z695 626 aa11.27□□□□□ -0.6
CLSTN3-201ENST00000266546 EPHX4Q8IUS5 362 aa11.27□□□□□ -0.6
CLSTN3-201ENST00000266546 RASSF5Q8WWW0 418 aa11.27□□□□□ -0.6
CLSTN3-201ENST00000266546 RANBP9Q96S59 729 aa11.27□□□□□ -0.6
CLSTN3-201ENST00000266546 SACM1LQ9NTJ5 587 aa11.27□□□□□ -0.6
CLSTN3-201ENST00000266546 CFAP97Q9P2B7 532 aa11.27□□□□□ -0.6
CLSTN3-201ENST00000266546 ERVK-11Q9UQG0 969 aa11.27□□□□□ -0.6
CLSTN3-201ENST00000266546 ZFP37Q9Y6Q3 630 aaPredicted RBP11.27□□□□□ -0.6
CLSTN3-201ENST00000266546 TNFRSF11BO00300 401 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 KERAO60938 352 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 ECI2O75521 394 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 WBP4O75554 376 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 C1RP00736 705 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 OGNP20774 298 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 SRP54P61011 504 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 SNRPD1P62314 119 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 BCL2L1Q07817 233 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 SLC13A2Q13183 592 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 GTF2H2Q13888 395 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 GTF2H2CQ6P1K8 395 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 LRRC17Q8N6Y2 441 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 PIH1D2Q8WWB5 315 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 AP3S1Q92572 193 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 TRMT2BQ96GJ1 504 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 ITPAQ9BY32 194 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 NEK6Q9HC98 313 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 C1orf109Q9NX04 203 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 NUDT4Q9NZJ9 180 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 RAB23Q9ULC3 237 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 CFL2Q9Y281 166 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 A0A1W2PQ67 120 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 CDK14O94921 469 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 MYCLP1P12525 358 aaPredicted RBP11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 ARL4DP49703 201 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 PLA2G16P53816 162 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 MADCAM1Q13477 382 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 PLEKHG7Q6ZR37 379 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 ARL14EPQ8N8R7 260 aaPredicted RBP11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 OR52J3Q8NH60 311 aa11.27□□□□□ -0.61
CLSTN3-201ENST00000266546 BRSK1Q8TDC3 778 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms