RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 PYHIN1Q6K0P9 492 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 AMIGO1Q86WK6 493 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 CD99L2Q8TCZ2 262 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 ZC3H10Q96K80 434 aaKnown RBP17.62■□□□□ 0.41
COL5A3-201ENST00000264828 SRMSQ9H3Y6 488 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 MRPS30Q9NP92 439 aaKnown RBP17.62■□□□□ 0.41
COL5A3-201ENST00000264828 NKX1-2Q9UD57 310 aaPredicted RBP17.62■□□□□ 0.41
COL5A3-201ENST00000264828 TMEM233B4DJY2 109 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 HMGCS1Q01581 520 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 PPP1R8Q12972 351 aaKnown RBP17.62■□□□□ 0.41
COL5A3-201ENST00000264828 CRB2Q5IJ48 1285 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 TRIM43Q96BQ3 446 aaPredicted RBP17.62■□□□□ 0.41
COL5A3-201ENST00000264828 SNX27Q96L92 541 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 C12orf66Q96MD2 445 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 MAGEH1Q9H213 219 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 TBC1D14Q9P2M4 693 aa17.62■□□□□ 0.41
COL5A3-201ENST00000264828 MYBPHLA2RUH7 354 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 TULP2O00295 520 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 TMEM63AO94886 807 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 RENP00797 406 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 ESR1P03372 595 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 EDNRAP25101 427 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 OR3A3P47888 321 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 OR3A2P47893 321 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 HERVK_113P63132 956 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 MARCH9Q86YJ5 346 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 STON2Q8WXE9 905 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 PYCR2Q96C36 320 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 AIFM2Q9BRQ8 373 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 ERVK-6Q9BXR3 956 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 LRRC3Q9BY71 257 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 COPS7AQ9UBW8 275 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 TLR4O00206 839 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 POP4O95707 220 aaKnown RBP17.61■□□□□ 0.41
COL5A3-201ENST00000264828 ZNF806P0C7X5 589 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 ZNF20P17024 532 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 PRKCDQ05655 676 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 IL10RBQ08334 325 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 NUP54Q7Z3B4 507 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 SLC35A5Q9BS91 424 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 FZD4Q9ULV1 537 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 NFAT5O94916 1531 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 A0A1W2PRB8 838 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 SLC35F4A4IF30 521 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 CCRL2O00421 344 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 STATHP02808 62 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 TSTQ16762 297 aaKnown RBP17.61■□□□□ 0.41
COL5A3-201ENST00000264828 FAM110CQ1W6H9 321 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 EIPR1Q53HC9 387 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 XKR4Q5GH76 650 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 NXPE1Q8N323 547 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 OR2AG1Q9H205 316 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 TLE6Q9H808 572 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 RPL17P18621 184 aaKnown RBP17.61■□□□□ 0.41
COL5A3-201ENST00000264828 HTR7P34969 479 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 GBX2P52951 348 aaPredicted RBP17.61■□□□□ 0.41
COL5A3-201ENST00000264828 TMBIM1Q969X1 311 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 KCTD7Q96MP8 289 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 ZSCAN5AQ9BUG6 496 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 SLC7A8Q9UHI5 535 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 PPM1HQ9ULR3 514 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 SPEF1Q9Y4P9 236 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 RPP14O95059 124 aaKnown RBP17.61■□□□□ 0.41
COL5A3-201ENST00000264828 SIX3O95343 332 aaPredicted RBP17.61■□□□□ 0.41
COL5A3-201ENST00000264828 MAP3K8P41279 467 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 NUDT6P53370 316 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 ERVK-21P61565 698 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 LRRC58Q96CX6 371 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 HNRNPABQ99729 332 aaKnown RBP17.61■□□□□ 0.41
COL5A3-201ENST00000264828 HEPHQ9BQS7 1158 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 TRPV4Q9HBA0 871 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 MEMO1Q9Y316 297 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 ROBO1Q9Y6N7 1651 aa17.61■□□□□ 0.41
COL5A3-201ENST00000264828 H3BSA7 217 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 ENGP17813 658 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 XRCC1P18887 633 aaPredicted RBP17.6■□□□□ 0.41
COL5A3-201ENST00000264828 OGFRL1Q5TC84 451 aaPredicted RBP17.6■□□□□ 0.41
COL5A3-201ENST00000264828 GLB1L3Q8NCI6 653 aaPredicted RBP17.6■□□□□ 0.41
COL5A3-201ENST00000264828 ZBED6CLQ96FA7 236 aaPredicted RBP17.6■□□□□ 0.41
COL5A3-201ENST00000264828 RC3H2Q9HBD1 1191 aaKnown RBP17.6■□□□□ 0.41
COL5A3-201ENST00000264828 HMGXB4Q9UGU5 601 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 MAFFQ9ULX9 164 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 CPQQ9Y646 472 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 LOC100509620A0A075B734 347 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 SLC31A1O15431 190 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 INMTO95050 263 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 TGFB1P01137 390 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 ASPAP45381 313 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 CRISP3P54108 245 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 LGI4Q8N135 537 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 CANT1Q8WVQ1 401 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 AKTIPQ9H8T0 292 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 CERS4Q9HA82 394 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 SLC22A1O15245 554 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 CYB5AP00167 134 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 RLN2P04090 185 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 HOXC12P31275 282 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 ZDHHC24Q6UX98 284 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 SLC22A16Q86VW1 577 aa17.6■□□□□ 0.41
COL5A3-201ENST00000264828 SDR16C5Q8N3Y7 309 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms