RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 ZSWIM9Q86XI8 627 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 NAT16Q8N8M0 369 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 FBLIM1Q8WUP2 373 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 ATP13A3Q9H7F0 1226 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 EXD2Q9NVH0 621 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 PPT2Q9UMR5 302 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 PLXNB3Q9ULL4 1909 aa14.85□□□□□ -0.03
DDX56-201ENST00000258772 ZNF821O75541 412 aaPredicted RBP14.84□□□□□ -0.03
DDX56-201ENST00000258772 DNAJB5O75953 348 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 CCDC159P0C7I6 412 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 CCR7P32248 378 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 MAGEA2P43356 314 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 SEMG2Q02383 582 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 SPCS2Q15005 226 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 PGS1Q32NB8 556 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 CPZQ66K79 652 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 Q6ZNB5 142 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 RNF168Q8IYW5 571 aaPredicted RBP14.84□□□□□ -0.03
DDX56-201ENST00000258772 ARL14EPQ8N8R7 260 aaPredicted RBP14.84□□□□□ -0.03
DDX56-201ENST00000258772 TESCQ96BS2 214 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 TRIT1Q9H3H1 467 aaKnown RBP14.84□□□□□ -0.03
DDX56-201ENST00000258772 ELOVL6Q9H5J4 265 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 CHCHD3Q9NX63 227 aaKnown RBP14.84□□□□□ -0.03
DDX56-201ENST00000258772 VNN3Q9NY84 501 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 KLHL42Q9P2K6 505 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 ZNF510Q9Y2H8 683 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 NPIPB15A6NHN6 443 aaPredicted RBP14.84□□□□□ -0.03
DDX56-201ENST00000258772 BCKDKO14874 412 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 INMTO95050 263 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 SDC1P18827 310 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 NR4A1P22736 598 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 RAPSNQ13702 412 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 VEPH1Q14D04 833 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 GGTA1PQ4G0N0 100 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 SLC44A4Q53GD3 710 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 SHQ1Q6PI26 577 aaKnown RBP14.84□□□□□ -0.03
DDX56-201ENST00000258772 CRTC1Q6UUV9 634 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 ZNF551Q7Z340 670 aaPredicted RBP14.84□□□□□ -0.03
DDX56-201ENST00000258772 CYP4Z1Q86W10 505 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 ZDHHC21Q8IVQ6 265 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 FAM9CQ8IZT9 166 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 CMTM7Q96FZ5 175 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 EGLN2Q96KS0 407 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 ZDHHC3Q9NYG2 299 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 GPRC5BQ9NZH0 403 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 ENPP5Q9UJA9 477 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 FBXO10Q9UK96 956 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 SNX6Q9UNH7 406 aa14.84□□□□□ -0.03
DDX56-201ENST00000258772 KCNE1BA0A087WTH5 132 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 MITFO75030 526 aaPredicted RBP14.83□□□□□ -0.03
DDX56-201ENST00000258772 XYLBO75191 536 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 CCNDBP1O95273 360 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 ITGAMP11215 1152 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 PRPH2P23942 346 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 PSMD7P51665 324 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 PTPN5P54829 565 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 GP2P55259 537 aaKnown RBP14.83□□□□□ -0.03
DDX56-201ENST00000258772 B4GALNT1Q00973 533 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 CARD16Q5EG05 197 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 DGKKQ5KSL6 1271 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 TPGS2Q68CL5 300 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 LHX8Q68G74 356 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 DOK6Q6PKX4 331 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 UBE2R2Q712K3 238 aaPredicted RBP14.83□□□□□ -0.03
DDX56-201ENST00000258772 LRRC70Q7Z2Q7 622 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 ANKRD13BQ86YJ7 626 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 SLC22A15Q8IZD6 547 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 CENPSQ8N2Z9 138 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 PIK3C3Q8NEB9 887 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 ABHD11Q8NFV4 315 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 CNIH3Q8TBE1 160 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 ZNF566Q969W8 418 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 TBC1D20Q96BZ9 403 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 IGSF21Q96ID5 467 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 HHIPQ96QV1 700 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 LYSMD1Q96S90 227 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 CCDC90BQ9GZT6 254 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 ABCG8Q9H221 673 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 CLEC4EQ9ULY5 219 aa14.83□□□□□ -0.03
DDX56-201ENST00000258772 M0QX08 132 aa14.83□□□□□ -0.04
DDX56-201ENST00000258772 RFXANKO14593 260 aa14.83□□□□□ -0.04
DDX56-201ENST00000258772 XPNPEP2O43895 674 aa14.83□□□□□ -0.04
DDX56-201ENST00000258772 NDUFS2O75306 463 aa14.83□□□□□ -0.04
DDX56-201ENST00000258772 LRATO95237 230 aa14.83□□□□□ -0.04
DDX56-201ENST00000258772 FTH1P02794 183 aa14.83□□□□□ -0.04
DDX56-201ENST00000258772 OCM2P0CE71 109 aa14.83□□□□□ -0.04
DDX56-201ENST00000258772 OCMP0CE72 109 aaPredicted RBP14.83□□□□□ -0.04
DDX56-201ENST00000258772 IL5RAQ01344 420 aa14.83□□□□□ -0.04
DDX56-201ENST00000258772 EMX1Q04741 257 aaPredicted RBP14.83□□□□□ -0.04
DDX56-201ENST00000258772 SLC14A1Q13336 389 aa14.83□□□□□ -0.04
DDX56-201ENST00000258772 NR1D2Q14995 579 aa14.83□□□□□ -0.04
DDX56-201ENST00000258772 TXNDC8Q6A555 127 aa14.83□□□□□ -0.04
DDX56-201ENST00000258772 CHPT1Q8WUD6 406 aa14.83□□□□□ -0.04
DDX56-201ENST00000258772 APIPQ96GX9 242 aa14.83□□□□□ -0.04
DDX56-201ENST00000258772 COPS8Q99627 209 aa14.83□□□□□ -0.04
DDX56-201ENST00000258772 BARD1Q99728 777 aaKnown RBP14.83□□□□□ -0.04
DDX56-201ENST00000258772 SLC12A9Q9BXP2 914 aa14.83□□□□□ -0.04
DDX56-201ENST00000258772 THG1LQ9NWX6 298 aaKnown RBP14.83□□□□□ -0.04
DDX56-201ENST00000258772 SAMD4AQ9UPU9 718 aaKnown RBP14.83□□□□□ -0.04
DDX56-201ENST00000258772 PCDHGB1Q9Y5G3 927 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms