RNA–Protein interactions for RNA: ENST00000246957.9

TRAP1-201, Transcript of TNF receptor associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAP1, Length 2,296 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-201ENST00000246957 KIR3DX1Q9H7L2 352 aa12.67□□□□□ -0.38
TRAP1-201ENST00000246957 SYNDIG1Q9H7V2 258 aa12.67□□□□□ -0.38
TRAP1-201ENST00000246957 CUEDC1Q9NWM3 386 aaPredicted RBP12.67□□□□□ -0.38
TRAP1-201ENST00000246957 MARCOQ9UEW3 520 aaPredicted RBP12.67□□□□□ -0.38
TRAP1-201ENST00000246957 ZNF225Q9UK10 706 aa12.67□□□□□ -0.38
TRAP1-201ENST00000246957 PTBP2Q9UKA9 531 aaKnown RBP12.67□□□□□ -0.38
TRAP1-201ENST00000246957 PTGDR2Q9Y5Y4 395 aa12.67□□□□□ -0.38
TRAP1-201ENST00000246957 CCDC88CQ9P219 2028 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 E2F3O00716 465 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 SYPP08247 313 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 LSSP48449 732 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 NUBP1P53384 320 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 FOXA1P55317 472 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 CCDC153Q494R4 210 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 C14orf28Q4W4Y0 310 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 CATSPEREQ5SY80 951 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 LRRC56Q8IYG6 542 aaPredicted RBP12.66□□□□□ -0.38
TRAP1-201ENST00000246957 TBC1D21Q8IYX1 336 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 TEX9Q8N6V9 391 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 PDPRQ8NCN5 879 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 OR4C6Q8NH72 309 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 TRPC4APQ8TEL6 797 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 CCDC74AQ96AQ1 378 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 PPP1R36Q96LQ0 422 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 MIPEPQ99797 713 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 SSU72Q9NP77 194 aaKnown RBP12.66□□□□□ -0.38
TRAP1-201ENST00000246957 EVA1BQ9NVM1 165 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 TAC3Q9UHF0 121 aa12.66□□□□□ -0.38
TRAP1-201ENST00000246957 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.65□□□□□ -0.38
TRAP1-201ENST00000246957 F8W8V4 182 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 TM9SF1O15321 606 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 HIST1H2AGP0C0S8 130 aaPredicted RBP12.65□□□□□ -0.38
TRAP1-201ENST00000246957 NEFHP12036 1026 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 CD59P13987 128 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 HIST1H2ADP20671 130 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 GRIA3P42263 894 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 PNLIPRP1P54315 467 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 BST1Q10588 318 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 SETDB1Q15047 1291 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 AASDHQ4L235 1098 aaPredicted RBP12.65□□□□□ -0.38
TRAP1-201ENST00000246957 ZNF678Q5SXM1 525 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 UNC5DQ6UXZ4 953 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 WASH2PQ6VEQ5 465 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 DGLUCYQ7Z3D6 616 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 KIAA2013Q8IYS2 634 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 ADGRF3Q8IZF5 1079 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 LSMEM2Q8N112 164 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 SDR16C5Q8N3Y7 309 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 ZNF740Q8NDX6 193 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 DYDC1Q8WWB3 177 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 HIST1H2AHQ96KK5 128 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 HIST1H2AJQ99878 128 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 H2AFJQ9BTM1 129 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 GSTO2Q9H4Y5 243 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 WASH6PQ9NQA3 447 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 PCTPQ9UKL6 214 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 COL27A1Q8IZC6 1860 aaPredicted RBP12.65□□□□□ -0.38
TRAP1-201ENST00000246957 GSAPA4D1B5 854 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 E7EQ34 232 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 HCRTR1O43613 425 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 SH3BGRLO75368 114 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 JUNP05412 331 aaKnown RBP12.65□□□□□ -0.38
TRAP1-201ENST00000246957 CTSBP07858 339 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 ANXA5P08758 320 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 ATXN8OSP0DMR3 200 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 KITP10721 976 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 XRCC1P18887 633 aaPredicted RBP12.65□□□□□ -0.38
TRAP1-201ENST00000246957 ATP5F1P24539 256 aaPredicted RBP12.65□□□□□ -0.38
TRAP1-201ENST00000246957 VARSP26640 1264 aaKnown RBP12.65□□□□□ -0.38
TRAP1-201ENST00000246957 SERPINB3P29508 390 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 ARL1P40616 181 aaPredicted RBP12.65□□□□□ -0.38
TRAP1-201ENST00000246957 SEC24CP53992 1094 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 SNRPNP63162 240 aaKnown RBP12.65□□□□□ -0.38
TRAP1-201ENST00000246957 BIRC2Q13490 618 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 SNAP47Q5SQN1 464 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.65□□□□□ -0.38
TRAP1-201ENST00000246957 THEMIS2Q5TEJ8 643 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 CLEC6AQ6EIG7 209 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 TMEM26Q6ZUK4 368 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 ARL10Q8N8L6 244 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 NEIL2Q969S2 332 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 RAD51AP1Q96B01 352 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 NUDT4Q9NZJ9 180 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 FER1L5A0AVI2 2057 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 ADAMTS20P59510 1910 aa12.65□□□□□ -0.38
TRAP1-201ENST00000246957 IGKV1-8A0A0C4DH67 115 aa12.64□□□□□ -0.39
TRAP1-201ENST00000246957 EIF3FO00303 357 aaPredicted RBP12.64□□□□□ -0.39
TRAP1-201ENST00000246957 B4GAT1O43505 415 aa12.64□□□□□ -0.39
TRAP1-201ENST00000246957 SMIM24O75264 130 aa12.64□□□□□ -0.39
TRAP1-201ENST00000246957 CD22P20273 847 aa12.64□□□□□ -0.39
TRAP1-201ENST00000246957 PKLRP30613 574 aa12.64□□□□□ -0.39
TRAP1-201ENST00000246957 CSF2RBP32927 897 aa12.64□□□□□ -0.39
TRAP1-201ENST00000246957 PRKAA2P54646 552 aa12.64□□□□□ -0.39
TRAP1-201ENST00000246957 LIPMQ5VYY2 423 aa12.64□□□□□ -0.39
TRAP1-201ENST00000246957 OGFOD3Q6PK18 319 aa12.64□□□□□ -0.39
TRAP1-201ENST00000246957 SCIMPQ6UWF3 145 aa12.64□□□□□ -0.39
TRAP1-201ENST00000246957 FAM92BQ6ZTR7 304 aa12.64□□□□□ -0.39
TRAP1-201ENST00000246957 GOLGA7Q7Z5G4 137 aa12.64□□□□□ -0.39
TRAP1-201ENST00000246957 AMIGO1Q86WK6 493 aa12.64□□□□□ -0.39
TRAP1-201ENST00000246957 MARCH9Q86YJ5 346 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms