RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ZNF570Q96NI8 536 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 FCRL4Q96PJ5 515 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 SLC39A3Q9BRY0 314 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 CNPPD1Q9BV87 410 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 WDR26Q9H7D7 661 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 ADAP2Q9NPF8 381 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 CCDC85CA6NKD9 419 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 CLIC1O00299 241 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 SAP18O00422 153 aaKnown RBP11.26□□□□□ -0.61
NOD1-201ENST00000222823 PITPNM1O00562 1244 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 XKRYO14609 159 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 CHST10O43529 356 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 MPZL2O60487 215 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 PRKAR1AP10644 381 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 CCT3P49368 545 aaKnown RBP11.26□□□□□ -0.61
NOD1-201ENST00000222823 BNC1Q01954 994 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 FAM131AQ6UXB0 335 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 LRRC17Q8N6Y2 441 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 DCAF4L2Q8NA75 395 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 CAPSLQ8WWF8 208 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 DNAAF2Q9NVR5 837 aaKnown RBP11.26□□□□□ -0.61
NOD1-201ENST00000222823 MRPS17Q9Y2R5 130 aaKnown RBP11.26□□□□□ -0.61
NOD1-201ENST00000222823 FAM240BA0A1B0GVZ2 78 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 RIIAD1A6NNX1 92 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 STX16-NPEPL1H3BU86 382 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 SLC30A4O14863 429 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 MYLK3Q32MK0 819 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 PDE12Q6L8Q7 609 aaKnown RBP11.26□□□□□ -0.61
NOD1-201ENST00000222823 CGB2Q6NT52 195 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 GPR153Q6NV75 609 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 CYS1Q717R9 158 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 LAPTM4BQ86VI4 370 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 CILP2Q8IUL8 1156 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 ARFGAP1Q8N6T3 406 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 OLIG1Q8TAK6 271 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 FAM110BQ8TC76 370 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 CYB5D2Q8WUJ1 264 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 RAB11FIP5Q9BXF6 653 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 C1orf21Q9H246 121 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 MCUBQ9NWR8 336 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 COMMD9Q9P000 198 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 PRKAB1Q9Y478 270 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 UBR3Q6ZT12 1888 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 PRAMEF11O60813 436 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 H6PDO95479 791 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 AOC1P19801 751 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 VARSP26640 1264 aaKnown RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 GCAP28676 217 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 ALDH4A1P30038 563 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 GRSF1Q12849 480 aaKnown RBP eCLIP11.25□□□□□ -0.61
NOD1-201ENST00000222823 GPM6BQ13491 265 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 MBOAT1Q6ZNC8 495 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 PHTF2Q8N3S3 785 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 ZNF433Q8N7K0 673 aaPredicted RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 SLC38A3Q99624 504 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 COQ7Q99807 217 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 MRPS30Q9NP92 439 aaKnown RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 CTPS2Q9NRF8 586 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 TMEM248Q9NWD8 314 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 ZIM2Q9NZV7 527 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 MKL2Q9ULH7 1088 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 AIREO43918 545 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 NOBOXO60393 691 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 TPST2O60704 377 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 KLHL18O94889 574 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 AP2A2O94973 939 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 HSD17B2P37059 387 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 MNDAP41218 407 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 GDF5P43026 501 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 PITX1P78337 314 aaPredicted RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 LRRC32Q14392 662 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 OR9I1Q8NGQ6 314 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 OR5K1Q8NHB7 308 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 NAT14Q8WUY8 206 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 FAR1Q8WVX9 515 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 KCNN1Q92952 543 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 RFKQ969G6 155 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 KIAA1191Q96A73 305 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 GAS2L1Q99501 681 aaPredicted RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 DHRS4Q9BTZ2 278 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 CARS2Q9HA77 564 aaKnown RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 POLMQ9NP87 494 aaPredicted RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 IL1RAPQ9NPH3 570 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 GPC6Q9Y625 555 aaPredicted RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 CPSF4LA6NMK7 179 aaKnown RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 E7ENX8 843 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 POP7O75817 140 aaKnown RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 PAPSS2O95340 614 aaPredicted RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 ANXA8P13928 327 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 DNAJB1P25685 340 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 BLKP51451 505 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 PTGES3Q15185 160 aaKnown RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 CDHR3Q6ZTQ4 885 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 C14orf80Q86SX3 495 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 RANBP3LQ86VV4 465 aaPredicted RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 NUDT13Q86X67 352 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 GPATCH1Q9BRR8 931 aaKnown RBP11.25□□□□□ -0.61
NOD1-201ENST00000222823 AMBNQ9NP70 447 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 ABCB9Q9NP78 766 aa11.25□□□□□ -0.61
NOD1-201ENST00000222823 PPM1HQ9ULR3 514 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms