RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 NOGQ13253 232 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 ASTLQ6HA08 431 aaPredicted RBP14.24□□□□□ -0.13
CNOT3-201ENST00000221232 TPRG1Q6ZUI0 275 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 LILRA3Q8N6C8 439 aaPredicted RBP14.24□□□□□ -0.13
CNOT3-201ENST00000221232 ZNF366Q8N895 744 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 ADAMTS16Q8TE57 1224 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 ACDQ96AP0 544 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 OSBPL10Q9BXB5 764 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 BRD9Q9H8M2 597 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 PCDH12Q9NPG4 1184 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 SERHLQ9NQF3 203 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 TRPS1Q9UHF7 1281 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 TMEM202A6NGA9 273 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 NOL3O60936 208 aaKnown RBP14.24□□□□□ -0.13
CNOT3-201ENST00000221232 PRSS23O95084 383 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 C7P10643 843 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 CRHBPP24387 322 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 DCTP40126 519 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 SNRPD1P62314 119 aaKnown RBP14.24□□□□□ -0.13
CNOT3-201ENST00000221232 IL5RAQ01344 420 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 CHIT1Q13231 466 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 BROXQ5VW32 411 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 ZNF773Q6PK81 442 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 VTCN1Q7Z7D3 282 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 USP7Q93009 1102 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 SCRN2Q96FV2 425 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 MED8Q96G25 268 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 DCAF13Q9NV06 445 aaKnown RBP14.24□□□□□ -0.13
CNOT3-201ENST00000221232 HCFC1R1Q9NWW0 138 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 FBXO10Q9UK96 956 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 UNC80Q8N2C7 3258 aa14.24□□□□□ -0.13
CNOT3-201ENST00000221232 TRIM64A6NGJ6 449 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 NEDD8-MDP1E9PL57 170 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 PITPNM1O00562 1244 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 AQP1P29972 269 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 GSSP48637 474 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 LSM3P62310 102 aaKnown RBP14.23□□□□□ -0.13
CNOT3-201ENST00000221232 TLE2Q04725 743 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 RAB33AQ14088 237 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 GPR33Q49SQ1 333 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 C6orf141Q5SZD1 244 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 USP45Q70EL2 814 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 RNF168Q8IYW5 571 aaPredicted RBP14.23□□□□□ -0.13
CNOT3-201ENST00000221232 CLECL1Q8IZS7 167 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 DRAXINQ8NBI3 349 aaPredicted RBP14.23□□□□□ -0.13
CNOT3-201ENST00000221232 ELMO1Q92556 727 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 RIBC2Q9H4K1 309 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 LOC100130705A0A1B0GUX0 176 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 AXIN1O15169 862 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 EFEMP2O95967 443 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 OR56A5P0C7T3 313 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 PSMD7P51665 324 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 CARD16Q5EG05 197 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 XAF1Q6GPH4 301 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 Q6ZVL8 140 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 SPARTQ8N0X7 666 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 EID3Q8N140 333 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 TMEM132CQ8N3T6 1108 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 GLB1L3Q8NCI6 653 aaPredicted RBP14.23□□□□□ -0.13
CNOT3-201ENST00000221232 CHDHQ8NE62 594 aaPredicted RBP14.23□□□□□ -0.13
CNOT3-201ENST00000221232 CSF3RQ99062 836 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 SLC46A2Q9BY10 475 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 ABCG2Q9UNQ0 655 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 DOCK6Q96HP0 2047 aa14.23□□□□□ -0.13
CNOT3-201ENST00000221232 PLXNA4Q9HCM2 1894 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 LEFTY2O00292 366 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 CCL16O15467 120 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 FKBP9O95302 570 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 NTRK1P04629 796 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 C1SP09871 688 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 DCKP27707 260 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 PBLDP30039 288 aaPredicted RBP14.22□□□□□ -0.13
CNOT3-201ENST00000221232 FMO3P31513 532 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 CLDN8P56748 225 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 CCSMST1Q4G0I0 132 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 MPPE1Q53F39 396 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 FKBP9P1Q75LS8 142 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 CYP2U1Q7Z449 544 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 ZDHHC21Q8IVQ6 265 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 ST13P5Q8NFI4 369 aaPredicted RBP14.22□□□□□ -0.13
CNOT3-201ENST00000221232 PXYLP1Q8TE99 480 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 CYB5D2Q8WUJ1 264 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 TANKQ92844 425 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 UBE2FQ969M7 185 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 PANX1Q96RD7 426 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 SH3GL1Q99961 368 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 C8orf4Q9NR00 106 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 SNX6Q9UNH7 406 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 ERVK-11Q9UQG0 969 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 TGM5O43548 720 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 INMTO95050 263 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 SCELO95171 688 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 CCNA2P20248 432 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 AOAHP28039 575 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 PPP2R2BQ00005 443 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 LYPLAL1Q5VWZ2 237 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 TTC23Q5W5X9 447 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 PRR23BQ6ZRT6 265 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 CEP68Q76N32 757 aa14.22□□□□□ -0.13
CNOT3-201ENST00000221232 ADHFE1Q8IWW8 467 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms