RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ZFYVE1Q9HBF4 777 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 PARVBQ9HBI1 364 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 IL26Q9NPH9 171 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 SCN5AQ14524 2016 aa16.85■□□□□ 0.29
USB1-201ENST00000219281 A0A096LPI6 279 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 H7C4K7 107 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 PER2O15055 1255 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 STK16O75716 305 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 CLDN7O95471 211 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 EFEMP2O95967 443 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 PDYNP01213 254 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 RPL17P18621 184 aaKnown RBP16.84■□□□□ 0.29
USB1-201ENST00000219281 IL18R1Q13478 541 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 RFX4Q33E94 735 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 CARD16Q5EG05 197 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 LRIF1Q5T3J3 769 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 PAF1Q8N7H5 531 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 FBXO22Q8NEZ5 403 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 UBTD2Q8WUN7 234 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 FBLIM1Q8WUP2 373 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 TMEM175Q9BSA9 504 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 MTRRQ9UBK8 725 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 DAPK2Q9UIK4 370 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 CRLS1Q9UJA2 301 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 A8MX80 341 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 TBL1XO60907 577 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 ZNF682O95780 498 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 UGT2B4P06133 528 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 ITGAMP11215 1152 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 ITGALP20701 1170 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 ACRV1P26436 265 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 NEK2P51955 445 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 LSM3P62310 102 aaKnown RBP16.84■□□□□ 0.29
USB1-201ENST00000219281 ELAVL2Q12926 359 aaKnown RBP16.84■□□□□ 0.29
USB1-201ENST00000219281 GTF2H3Q13889 308 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 ZC3H12BQ5HYM0 836 aaKnown RBP16.84■□□□□ 0.29
USB1-201ENST00000219281 CPZQ66K79 652 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 SHQ1Q6PI26 577 aaKnown RBP16.84■□□□□ 0.29
USB1-201ENST00000219281 B3GNT8Q7Z7M8 397 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 RNF168Q8IYW5 571 aaPredicted RBP16.84■□□□□ 0.29
USB1-201ENST00000219281 PIK3C3Q8NEB9 887 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 OR7A2PQ8NGA2 310 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 NDNFQ8TB73 568 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 C2orf15Q8WU43 125 aaKnown RBP16.84■□□□□ 0.29
USB1-201ENST00000219281 RORBQ92753 470 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 ZNF566Q969W8 418 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 TSSK3Q96PN8 268 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 ALPK1Q96QP1 1244 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 VN1R3Q9BXE9 311 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 GPRC5BQ9NZH0 403 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 INTS6Q9UL03 887 aaKnown RBP16.84■□□□□ 0.29
USB1-201ENST00000219281 CPQQ9Y646 472 aa16.84■□□□□ 0.29
USB1-201ENST00000219281 KPNA4O00629 521 aaPredicted RBP16.83■□□□□ 0.28
USB1-201ENST00000219281 LRATO95237 230 aa16.83■□□□□ 0.28
USB1-201ENST00000219281 CLDN9O95484 217 aa16.83■□□□□ 0.28
USB1-201ENST00000219281 ALDH4A1P30038 563 aa16.83■□□□□ 0.28
USB1-201ENST00000219281 ATN1P54259 1190 aaPredicted RBP16.83■□□□□ 0.28
USB1-201ENST00000219281 CLDN8P56748 225 aa16.83■□□□□ 0.28
USB1-201ENST00000219281 NPTX1Q15818 432 aa16.83■□□□□ 0.28
USB1-201ENST00000219281 INO80DQ53TQ3 878 aaPredicted RBP16.83■□□□□ 0.28
USB1-201ENST00000219281 PERM1Q5SV97 790 aa16.83■□□□□ 0.28
USB1-201ENST00000219281 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.83■□□□□ 0.28
USB1-201ENST00000219281 CEP68Q76N32 757 aa16.83■□□□□ 0.28
USB1-201ENST00000219281 DEFB118Q96PH6 123 aa16.83■□□□□ 0.28
USB1-201ENST00000219281 RMND5AQ9H871 391 aa16.83■□□□□ 0.28
USB1-201ENST00000219281 HMG20AQ9NP66 347 aa16.83■□□□□ 0.28
USB1-201ENST00000219281 VPS51Q9UID3 782 aa16.83■□□□□ 0.28
USB1-201ENST00000219281 PAIP2BQ9ULR5 123 aaKnown RBP16.83■□□□□ 0.28
USB1-201ENST00000219281 ABCG2Q9UNQ0 655 aa16.83■□□□□ 0.28
USB1-201ENST00000219281 MAN2B2Q9Y2E5 1009 aa16.83■□□□□ 0.28
USB1-201ENST00000219281 TRIM17Q9Y577 477 aa16.83■□□□□ 0.28
USB1-201ENST00000219281 PLXNA4Q9HCM2 1894 aa16.83■□□□□ 0.28
USB1-201ENST00000219281 MYO1GB0I1T2 1018 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 GABARAPO95166 117 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 KRT6AP02538 564 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 KRT6BP04259 564 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 IL1RNP18510 177 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 TACR1P25103 407 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 PTPN6P29350 595 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 CD6P30203 668 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 GKP32189 559 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 KRT6CP48668 564 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 DAPP51397 102 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 SLC14A1Q13336 389 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 CHRNA6Q15825 494 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 DOK6Q6PKX4 331 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 ZNF551Q7Z340 670 aaPredicted RBP16.82■□□□□ 0.28
USB1-201ENST00000219281 SNX29P2Q8IUI4 249 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 ADGRG2Q8IZP9 1017 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 DNAJB8Q8NHS0 232 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 ZFP90Q8TF47 636 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 SELENOMQ8WWX9 145 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 BHMTQ93088 406 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 TAMM41Q96BW9 452 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 REXO5Q96IC2 774 aaKnown RBP16.82■□□□□ 0.28
USB1-201ENST00000219281 MRPL9Q9BYD2 267 aaKnown RBP16.82■□□□□ 0.28
USB1-201ENST00000219281 AKIP1Q9NQ31 210 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 INIPQ9NRY2 104 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 PPT2Q9UMR5 302 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 PCDHGB1Q9Y5G3 927 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms