RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 DERL2Q9GZP9 239 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 EGLN1Q9GZT9 426 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 DDX47Q9H0S4 455 aaKnown RBP2.94□□□□□ -1.94
VIM-210ENST00000637053 SLC6A15Q9H2J7 730 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 ASB8Q9H765 288 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 GREM2Q9H772 168 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 TRIM45Q9H8W5 580 aaPredicted RBP2.94□□□□□ -1.94
VIM-210ENST00000637053 KIF9Q9HAQ2 790 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 RNPEPL1Q9HAU8 725 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 BCO1Q9HAY6 547 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 GLOD4Q9HC38 313 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 SLC40A1Q9NP59 571 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 DMAP1Q9NPF5 467 aaPredicted RBP2.94□□□□□ -1.94
VIM-210ENST00000637053 PNO1Q9NRX1 252 aaKnown RBP2.94□□□□□ -1.94
VIM-210ENST00000637053 SETD4Q9NVD3 440 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 HIF1ANQ9NWT6 349 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 RBAKQ9NYW8 714 aaPredicted RBP2.94□□□□□ -1.94
VIM-210ENST00000637053 GDE1Q9NZC3 331 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 DTLQ9NZJ0 730 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 VSX1Q9NZR4 365 aaPredicted RBP2.94□□□□□ -1.94
VIM-210ENST00000637053 HCN3Q9P1Z3 774 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 BTBD7Q9P203 1132 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 ZNF229Q9UJW7 825 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 AMFRQ9UKV5 643 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 TRPC5Q9UL62 973 aaPredicted RBP2.94□□□□□ -1.94
VIM-210ENST00000637053 MKLN1Q9UL63 735 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 WASF3Q9UPY6 502 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 ZDHHC9Q9Y397 364 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 NEU2Q9Y3R4 380 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.94□□□□□ -1.94
VIM-210ENST00000637053 CDY2AQ9Y6F7 541 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 CPDO75976 1380 aa2.94□□□□□ -1.94
VIM-210ENST00000637053 PRDM2Q13029 1718 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 UQCRHLA0A096LP55 91 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 ST20-MTHFSA0A0A6YYL1 179 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 A0A0B4J293 547 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 EDDM13A0A1B0GTR0 161 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 A0A1W2PPV4 95 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 TCRBV5S4A2TA0A5A2 114 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 KANSL1LA0AUZ9 987 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 PIPSLA2A3N6 862 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 BCLAF3A2AJT9 711 aaKnown RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 FUOMA2VDF0 154 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 C7orf72A4D263 438 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 SMCO2A6NFE2 343 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 ANKRD61A6NGH8 418 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 ASB14A6NK59 587 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 YDJCA8MPS7 323 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 FAM171A2A8MVW0 826 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CENPBD1B2RD01 187 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 ERVV-1B6SEH8 477 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 H7C1Q1 480 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 J3KTA2 159 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 MAN2B1O00754 1011 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 AIM2O14862 343 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 AURKAO14965 403 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 ANKRD28O15084 1053 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 COCHO43405 550 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 DENRO43583 198 aaKnown RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 CHMP2AO43633 222 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 OPHN1O60890 802 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 MITFO75030 526 aaPredicted RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 HSF2BPO75031 334 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 AVILO75366 819 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 RASSF9O75901 435 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 RNF8O76064 485 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 DFFBO76075 338 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 SNAPINO95295 136 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CELF2O95319 508 aaKnown RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 RAB3DO95716 219 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 GH1P01241 217 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 MBP02144 154 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CXCL10P02778 98 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 RLN1P04808 185 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 PGK2P07205 417 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 UQCRHP07919 91 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 HMBSP08397 361 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 UBTFL1P0CB47 393 aaPredicted RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 SLC2A3P11169 496 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CYP4B1P13584 511 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 COX7A2P14406 83 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 GNSP15586 552 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 TCF4P15884 667 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CTPS1P17812 591 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 M6PRP20645 277 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 GPTP24298 496 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 GIFP27352 417 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 PRDX5P30044 214 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 AKT2P31751 481 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 APOBEC3AP31941 199 aaPredicted RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 GTF2H1P32780 548 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 HTR7P34969 479 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 NAA10P41227 235 aaPredicted RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 SLC1A4P43007 532 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 KIR3DL2P43630 455 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CSNK1DP48730 415 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 CDC34P49427 236 aaPredicted RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 CSNK1EP49674 416 aaKnown RBP2.93□□□□□ -1.94
VIM-210ENST00000637053 RGS7P49802 495 aa2.93□□□□□ -1.94
VIM-210ENST00000637053 SERPINB9P50453 376 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms