RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 NOD2Q9HC29 1040 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 PCDH18Q9HCL0 1135 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 SLCO1B3Q9NPD5 702 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 CCM2LQ9NUG4 571 aaPredicted RBP4.76□□□□□ -1.65
LINC00550-201ENST00000629293 GPATCH2LQ9NWQ4 482 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 KLHL14Q9P2G3 628 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 CHKBQ9Y259 395 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 MDC1Q14676 2089 aaKnown RBP4.76□□□□□ -1.65
LINC00550-201ENST00000629293 NBPF19A0A087WUL8 3843 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 SPG11Q96JI7 2443 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 AREL1O15033 823 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 AP1G1O43747 822 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 SPAG6O75602 509 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 SNUPNO95149 360 aaKnown RBP4.76□□□□□ -1.65
LINC00550-201ENST00000629293 CD160O95971 181 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 TNFP01375 233 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 KRT16P08779 473 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 ELFN1P0C7U0 828 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 LIPCP11150 499 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 KRT4P19013 534 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 CA4P22748 312 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 AK4P27144 223 aaPredicted RBP4.76□□□□□ -1.65
LINC00550-201ENST00000629293 ETV4P43268 484 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 MAGEA3P43357 314 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 MAPK9P45984 424 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 CDH6P55285 790 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 SLC18A2Q05940 514 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 ACOX1Q15067 660 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 GRAMD1BQ3KR37 738 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 IGF2-ASQ6U949 168 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 C3orf62Q6ZUJ4 267 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 ARCQ7LC44 396 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 OTOAQ7RTW8 1153 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 TMPRSS9Q7Z410 1059 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 KDELC2Q7Z4H8 507 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 ZDHHC17Q8IUH5 632 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 ZNF683Q8IZ20 524 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 PDIK1LQ8N165 341 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 DENND6BQ8NEG7 585 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 ZNF398Q8TD17 642 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 OR1E3Q8WZA6 343 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 WDR92Q96MX6 357 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 LENG8Q96PV6 779 aaPredicted RBP4.76□□□□□ -1.65
LINC00550-201ENST00000629293 ZNF670Q9BS34 389 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 FRMD8Q9BZ67 464 aaPredicted RBP4.76□□□□□ -1.65
LINC00550-201ENST00000629293 LRMDAQ9H2I8 198 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 TTLL3Q9Y4R7 772 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 SPO11Q9Y5K1 396 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 USH1CQ9Y6N9 552 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 PCNX1Q96RV3 2341 aa4.76□□□□□ -1.65
LINC00550-201ENST00000629293 TCRBV9S1A1TA0A576 114 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 CFAP69A5D8W1 941 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 NOBOXO60393 691 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 RECQL5O94762 991 aaPredicted RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 HRGP04196 525 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 ADRA1DP25100 572 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 ETV3P41162 512 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 ELK3P41970 407 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 PTPN9P43378 593 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 MTNR1BP49286 362 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 HDAC4P56524 1084 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 YPEL5P62699 121 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 ELP6Q0PNE2 266 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 TBR1Q16650 682 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 UGP2Q16851 508 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 LINC00303Q3SY05 128 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 BOLA3Q53S33 107 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 LVRNQ6Q4G3 990 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 LYPD4Q6UWN0 246 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 CLEC14AQ86T13 490 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 TBC1D1Q86TI0 1168 aaPredicted RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 WDR48Q8TAF3 677 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 LRRC8CQ8TDW0 803 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 ZNF75CPQ92670 426 aaPredicted RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 CENPIQ92674 756 aaPredicted RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 UTP4Q969X6 686 aaKnown RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 LIN37Q96GY3 246 aaPredicted RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 C1orf74Q96LT6 269 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 HAPLN3Q96S86 360 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 CYTH2Q99418 400 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 SNRNP25Q9BV90 132 aaKnown RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 SLC25A18Q9H1K4 315 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 MYLK2Q9H1R3 596 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 MAGEH1Q9H213 219 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 PAK5Q9P286 719 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 TUBD1Q9UJT1 453 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 CHMP2BQ9UQN3 213 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 IGLV3-10A0A075B6K4 115 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 A0A0U1RQS6 177 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 DFFAO00273 331 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 PRPSAP2O60256 369 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 WFS1O76024 890 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 CSTF2P33240 577 aaKnown RBP eCLIP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 MSH2P43246 934 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 BASP1P80723 227 aaKnown RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 CDK5R2Q13319 367 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 EIF3IQ13347 325 aaKnown RBP4.75□□□□□ -1.65
LINC00550-201ENST00000629293 NFATC4Q14934 902 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 CLCA4Q14CN2 919 aa4.75□□□□□ -1.65
LINC00550-201ENST00000629293 DPYSL2Q16555 572 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms