RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 UMPSP11172 480 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 ITPKAP23677 461 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 OXTRP30559 389 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 ABRQ12979 859 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 EIF4HQ15056 248 aaKnown RBP19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 NRF1Q16656 503 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 CYP51A1Q16850 503 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 SLC44A4Q53GD3 710 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 C6orf52Q5T4I8 152 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 EP400NLQ6ZTU2 488 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 NLRP8Q86W28 1048 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 ST13P4Q8IZP2 240 aaPredicted RBP19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 TRPV3Q8NET8 790 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 OR8D1Q8WZ84 308 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 CIB1Q99828 191 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 AGPAT4Q9NRZ5 378 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 UBAP1Q9NZ09 502 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 FAM8A1Q9UBU6 413 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 PCDHB3Q9Y5E6 796 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 C2orf16Q68DN1 1984 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 TCF20Q9UGU0 1960 aaKnown RBP19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 C7orf72A4D263 438 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 AHCYL1O43865 530 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 HLA-EP13747 358 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 NCK1P16333 377 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 PBX2P40425 430 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 NEK2P51955 445 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 ELP6Q0PNE2 266 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 SELPLGQ14242 412 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 MAPKAPK3Q16644 382 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 SPANXN4Q5MJ08 99 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 PHC3Q8NDX5 983 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 ARRDC3Q96B67 414 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 CMTM7Q96FZ5 175 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 EPHX3Q9H6B9 360 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 USP22Q9UPT9 525 aa19.19■□□□□ 0.66
PCDHB11-202ENST00000624887 LRRK1Q38SD2 2015 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 UGDHO60701 494 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 PRPS2P11908 318 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 JUPP14923 745 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 PCSK2P16519 638 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 HRH2P25021 359 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 FASP25445 335 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 MAPK9P45984 424 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 OR4D2P58180 307 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 MTPNP58546 118 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 RPS14P62263 151 aaKnown RBP19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 ELAVL3Q14576 367 aaKnown RBP19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 DUSP6Q16828 381 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 PLA2G4EQ3MJ16 856 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 LIPJQ5W064 366 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 FRG2Q64ET8 278 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 TMEM220Q6QAJ8 160 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 RALGPS2Q86X27 583 aaPredicted RBP19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 KRTCAP2Q8N6L1 136 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 PAPD5Q8NDF8 572 aaKnown RBP19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 VN1R2Q8NFZ6 395 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 ATL1Q8WXF7 558 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 FGF13Q92913 245 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 CCDC138Q96M89 665 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 FRG2BQ96QU4 278 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 SLC29A1Q99808 456 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 SH3GL3Q99963 347 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 SFXN1Q9H9B4 322 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 VAPAQ9P0L0 249 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 MAGEL2Q9UJ55 1249 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 TMED5Q9Y3A6 229 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 AK5Q9Y6K8 562 aa19.18■□□□□ 0.66
PCDHB11-202ENST00000624887 HEPACAM2A8MVW5 462 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 AREL1O15033 823 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 SOD1P00441 154 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 CATP04040 527 aaKnown RBP19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 FSHRP23945 695 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 HALP42357 657 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 PREPP48147 710 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 CLDN8P56748 225 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 PRKCQQ04759 706 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 CHIT1Q13231 466 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 RNF220Q5VTB9 566 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 PPP4R4Q6NUP7 873 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 ZBTB49Q6ZSB9 765 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 ZNF765Q7L2R6 523 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 SLC22A15Q8IZD6 547 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 FAM9CQ8IZT9 166 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 LILRA3Q8N6C8 439 aaPredicted RBP19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 RPF2Q9H7B2 306 aaKnown RBP19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 CERS4Q9HA82 394 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 DLGAP4Q9Y2H0 992 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 COQ6Q9Y2Z9 468 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 ATG2AQ2TAZ0 1938 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 DFNA5O60443 496 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 FCGR1AP12314 374 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 ACPPP15309 386 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 NRIP1P48552 1158 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 CLCN2P51788 898 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 PLIN5Q00G26 463 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 ZNF33BQ06732 778 aa19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 THOC6Q86W42 341 aaKnown RBP19.17■□□□□ 0.66
PCDHB11-202ENST00000624887 KLHDC8AQ8IYD2 350 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 317.8 ms