RNA–Protein interactions for RNA: ENST00000619601.1

GAPDH-211, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-211ENST00000619601 SPHK1Q9NYA1 384 aa10.59□□□□□ -0.71
GAPDH-211ENST00000619601 KLHL42Q9P2K6 505 aa10.59□□□□□ -0.71
GAPDH-211ENST00000619601 SRPK3Q9UPE1 567 aa10.59□□□□□ -0.71
GAPDH-211ENST00000619601 MAD1L1Q9Y6D9 718 aa10.59□□□□□ -0.71
GAPDH-211ENST00000619601 COMMD10Q9Y6G5 202 aa10.59□□□□□ -0.71
GAPDH-211ENST00000619601 UBR5O95071 2799 aaPredicted RBP10.59□□□□□ -0.71
GAPDH-211ENST00000619601 CTAGE9A4FU28 777 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 C9J4A7 227 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 GOLGA8KD6RF30 607 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 MKRN2OSH3BPM6 223 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 GOLGA8TH3BQL2 631 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 GOLGA8MH3BSY2 632 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 SMAPO00193 183 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 OR2B3O76000 313 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 C1orf105O95561 183 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 PKMP14618 531 aaKnown RBP10.58□□□□□ -0.72
GAPDH-211ENST00000619601 CHRM3P20309 590 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 RORAP35398 523 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 NAA25Q14CX7 972 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 TTLL9Q3SXZ7 439 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 ZNF789Q5FWF6 425 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 ZC3H12BQ5HYM0 836 aaKnown RBP10.58□□□□□ -0.72
GAPDH-211ENST00000619601 ZNF470Q6ECI4 717 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 TLDC1Q6P9B6 456 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 FAM199XQ6PEV8 388 aaPredicted RBP10.58□□□□□ -0.72
GAPDH-211ENST00000619601 TRIM73Q86UV7 250 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 APLFQ8IW19 511 aaPredicted RBP10.58□□□□□ -0.72
GAPDH-211ENST00000619601 ZBTB2Q8N680 514 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 RNF31Q96EP0 1072 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 PDLIM2Q96JY6 352 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 NRTNQ99748 197 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 NAT9Q9BTE0 207 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 MENTQ9BUN1 341 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 NLNQ9BYT8 704 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 KLHL25Q9H0H3 589 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 CHST8Q9H2A9 424 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 FAM114A2Q9NRY5 505 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 PCMTD2Q9NV79 361 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 SPATA7Q9P0W8 599 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.58□□□□□ -0.72
GAPDH-211ENST00000619601 ASIC3Q9UHC3 531 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 PCYOX1Q9UHG3 505 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 PLAGL1Q9UM63 463 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 PLCL2Q9UPR0 1127 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 MAN2B2Q9Y2E5 1009 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 PADI2Q9Y2J8 665 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 CRYL1Q9Y2S2 319 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 KCNMB2Q9Y691 235 aa10.58□□□□□ -0.72
GAPDH-211ENST00000619601 SPTBP11277 2137 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 ZCWPW2A0A1B0GU75 182 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 CDC14CA4D256 554 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 ZNF839A8K0R7 811 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 TARM1B6A8C7 271 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 ZNF185O15231 689 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 ZSCAN9O15535 394 aaPredicted RBP10.57□□□□□ -0.72
GAPDH-211ENST00000619601 ZNF749O43361 778 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 NIPSNAP2O75323 286 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 RFPL1O75677 317 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 MATN4O95460 622 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 TTC4O95801 387 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 HSD17B2P37059 387 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 PMS2P54278 862 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 GNG11P61952 73 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 PTK6Q13882 451 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 GRB7Q14451 532 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 GBX1Q14549 363 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 SF1Q15637 639 aaKnown RBP10.57□□□□□ -0.72
GAPDH-211ENST00000619601 RNASEH2BQ5TBB1 312 aaKnown RBP10.57□□□□□ -0.72
GAPDH-211ENST00000619601 ATP1A1-AS1Q5TC04 95 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 RHBDD2Q6NTF9 364 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 NEK10Q6ZWH5 1172 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 CENPUQ71F23 418 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 SYTL1Q8IYJ3 562 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 LINC01555Q8NAE3 123 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 SLC38A9Q8NBW4 561 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.57□□□□□ -0.722e-7■□□□□ 10.6
GAPDH-211ENST00000619601 HMGCLL1Q8TB92 370 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 PROKR1Q8TCW9 393 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 DLG3Q92796 817 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 KCNJ9Q92806 393 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 ZUFSPQ96AP4 578 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 SIGLEC10Q96LC7 697 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 FAM167BQ9BTA0 163 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 NDC1Q9BTX1 674 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 FAM60AQ9NP50 221 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 C20orf96Q9NUD7 363 aaPredicted RBP10.57□□□□□ -0.72
GAPDH-211ENST00000619601 TXLNGQ9NUQ3 528 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 RNF14Q9UBS8 474 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 SNX7Q9UNH6 387 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 SAR1BQ9Y6B6 198 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 FAM169AQ9Y6X4 670 aa10.57□□□□□ -0.72
GAPDH-211ENST00000619601 SEC16AO15027 2179 aa10.56□□□□□ -0.72
GAPDH-211ENST00000619601 EIF3FO00303 357 aaPredicted RBP10.56□□□□□ -0.72
GAPDH-211ENST00000619601 DNALI1O14645 258 aaPredicted RBP10.56□□□□□ -0.72
GAPDH-211ENST00000619601 CATP04040 527 aaKnown RBP10.56□□□□□ -0.72
GAPDH-211ENST00000619601 CBSLP0DN79 551 aa10.56□□□□□ -0.72
GAPDH-211ENST00000619601 ENO3P13929 434 aaPredicted RBP10.56□□□□□ -0.72
GAPDH-211ENST00000619601 PGAM1P18669 254 aa10.56□□□□□ -0.72
GAPDH-211ENST00000619601 PEBP1P30086 187 aaKnown RBP10.56□□□□□ -0.72
GAPDH-211ENST00000619601 CBSP35520 551 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms