RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 GTF2A1P52655 376 aaPredicted RBP16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 DGKQP52824 942 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 TRAP1Q12931 704 aaKnown RBP16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 ENPP2Q13822 863 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 CYP2R1Q6VVX0 501 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 PQLC1Q8N2U9 271 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 EZH1Q92800 747 aaPredicted RBP16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 HIC2Q96JB3 615 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 C1orf109Q9NX04 203 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 EPS15L1Q9UBC2 864 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 PRKAB1Q9Y478 270 aa16.87■□□□□ 0.29
PCDHGC3-205ENST00000617641 LIN7AO14910 233 aaPredicted RBP16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 PCDH8O95206 1070 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 JAK1P23458 1154 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 IMPA1P29218 277 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 FOXM1Q08050 763 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 MAD2L1Q13257 205 aaPredicted RBP16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 CAMK2GQ13555 558 aaPredicted RBP16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 TRIP10Q15642 601 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 SMU1Q2TAY7 513 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 C2orf27AQ580R0 203 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 DOK6Q6PKX4 331 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 SUSD1Q6UWL2 747 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 RIPOR3Q96MK2 946 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 MYCBPQ99417 103 aaPredicted RBP16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 PCDHA9Q9Y5H5 950 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 ATG2BQ96BY7 2078 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 K7EQS6 105 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 POP7O75817 140 aaKnown RBP16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 CD22P20273 847 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 VARSP26640 1264 aaKnown RBP16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 IRF8Q02556 426 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 CMPK2Q5EBM0 449 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 RABL3Q5HYI8 236 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 RNF175Q8N4F7 328 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 ATL1Q8WXF7 558 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 TMEM125Q96AQ2 219 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 OR4K3Q96R72 315 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 CLDND1Q9NY35 253 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 TICRRQ7Z2Z1 1910 aa16.86■□□□□ 0.29
PCDHGC3-205ENST00000617641 CKAP5Q14008 2032 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 A0A1W2PP55 124 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 E7EQ34 232 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 C1orf105O95561 183 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 NFE2L1Q14494 772 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 CACHD1Q5VU97 1274 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 PNCKQ6P2M8 343 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 HEATR4Q86WZ0 1026 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 KIAA2013Q8IYS2 634 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 HDDC3Q8N4P3 179 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 CLHC1Q8NHS4 586 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 ECSITQ9BQ95 431 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 COPS7BQ9H9Q2 264 aaPredicted RBP16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 C6orf203Q9P0P8 240 aaPredicted RBP16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 VEGFDO43915 354 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 RNASEH1O60930 286 aaKnown RBP16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 C8BP07358 591 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 JUPP14923 745 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 KIR2DL1P43626 348 aaPredicted RBP16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 MAPK9P45984 424 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 KIAA0040Q15053 153 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 WSCD2Q2TBF2 565 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 XKR6Q5GH73 641 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 FRG2Q64ET8 278 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 TRMT11Q7Z4G4 463 aaKnown RBP16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 DHFR2Q86XF0 187 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 KRTCAP2Q8N6L1 136 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 COX14Q96I36 57 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 ZNF514Q96K75 400 aaPredicted RBP16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 LINC00615Q96LM1 132 aaPredicted RBP16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 TMEM74Q96NL1 305 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 FRG2BQ96QU4 278 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 DLGAP4Q9Y2H0 992 aa16.85■□□□□ 0.29
PCDHGC3-205ENST00000617641 PRSS51A0A1B0GVH4 220 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 CASQ2O14958 399 aaPredicted RBP16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 BCKDHAP12694 445 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 HSD17B1P14061 328 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 ATP6V1B2P21281 511 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 PLIN5Q00G26 463 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 USP39Q53GS9 565 aaKnown RBP16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 KIAA1211LQ6NV74 962 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 ADAMTSL4Q6UY14 1074 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 FAM83HQ6ZRV2 1179 aaPredicted RBP16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 C11orf96Q7Z7L8 435 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 LILRA2Q8N149 483 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 ZBTB18Q99592 522 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 LGR4Q9BXB1 951 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 DPY30Q9C005 99 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 ASIC5Q9NY37 505 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 EGFL7Q9UHF1 273 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 GPR34Q9UPC5 381 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 TRPM6Q9BX84 2022 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 SPTBN5Q9NRC6 3674 aaKnown RBP16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 DYTNA2CJ06 578 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 AP1G1O43747 822 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 ADH1BP00325 375 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 DOC2AQ14183 400 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 SFT2D3Q587I9 215 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 LIPJQ5W064 366 aa16.84■□□□□ 0.29
PCDHGC3-205ENST00000617641 DPP10Q8N608 796 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms