RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 PROKR1Q8TCW9 393 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 PROX1Q92786 737 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 SCLYQ96I15 445 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 DPH2Q9BQC3 489 aaPredicted RBP6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 YTHDF1Q9BYJ9 559 aaKnown RBP6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 ARHGAP39Q9C0H5 1083 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 OSGEPL1Q9H4B0 414 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 MRPL17Q9NRX2 175 aaKnown RBP6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 FAM118AQ9NWS6 357 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 GABRQQ9UN88 632 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 DHRS7Q9Y394 339 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 OAS3Q9Y6K5 1087 aaKnown RBP6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 LOXHD1Q8IVV2 1947 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 MYO9BQ13459 2157 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 EFCAB9A8MZ26 197 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 COCHO43405 550 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 KDELR3O43731 214 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 AP1G1O43747 822 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 ERN1O75460 977 aaKnown RBP6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 IFNA14P01570 189 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 CKBP12277 381 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 BCKDHAP12694 445 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 RPL34P49207 117 aaKnown RBP6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 SLC16A1P53985 500 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 FKBP1BP68106 108 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 GPR17Q13304 367 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 CYP2A13Q16696 494 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 ZC3H12BQ5HYM0 836 aaKnown RBP6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 TRAF7Q6Q0C0 670 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 TMC5Q6UXY8 1006 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 CD200R1Q8TD46 325 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 TSPEARQ8WU66 669 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 FAR1Q8WVX9 515 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 MYDGFQ969H8 173 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 ITFG2Q969R8 447 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 BIRC8Q96P09 236 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 YME1L1Q96TA2 773 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 KAT8Q9H7Z6 458 aaKnown RBP6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 POPDC3Q9HBV1 291 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 LTB4R2Q9NPC1 389 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 WDR70Q9NW82 654 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 BTBD3Q9Y2F9 522 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 PCDHGA8Q9Y5G5 932 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 KCNE2Q9Y6J6 123 aa6.71□□□□□ -1.34
SYNPO2-206ENST00000610556 LOC285095A0A1B0GVY8 99 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 MTHFD2P13995 350 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 SHMT2P34897 504 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 ACLYP53396 1101 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 PLA2G16P53816 162 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 AP1S1P61966 158 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 CYP4F8P98187 520 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 CNTN1Q12860 1018 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 AAK1Q2M2I8 961 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 HKDC1Q2TB90 917 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 SETMARQ53H47 684 aaPredicted RBP6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 XKR4Q5GH76 650 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 CASP12Q6UXS9 341 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 TRIM69Q86WT6 500 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 BBS7Q8IWZ6 715 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 TMEM151AQ8N4L1 468 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 MFSD2AQ8NA29 543 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 PDPRQ8NCN5 879 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 UBASH3BQ8TF42 649 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 CLP1Q92989 425 aaKnown RBP6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 MTERF3Q96E29 417 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 PYURFQ96I23 114 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 CCNB1IP1Q9NPC3 277 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 TMEM9Q9P0T7 183 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 VPS51Q9UID3 782 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 FAM220BPB1ANY3 271 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 NEDD8-MDP1E9PL57 170 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 H0YAE9 185 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 M0QZQ0 153 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 PSMD11O00231 422 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 OR10H3O60404 316 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 RPS17P08708 135 aaKnown RBP6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 PRPS2P11908 318 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 MATN1P21941 496 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 IL12AP29459 219 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 GRK3P35626 688 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 NSG1P42857 185 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 CDC42P60953 191 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 POLR2LP62875 67 aaKnown RBP6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 SFSWAPQ12872 951 aaKnown RBP6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 APOFQ13790 326 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 PON2Q15165 354 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 ARMCX4Q5H9R4 360 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 RTP2Q5QGT7 225 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 BORAQ6PGQ7 559 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 TBPL2Q6SJ96 375 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 PRR23BQ6ZRT6 265 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 VTCN1Q7Z7D3 282 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 SLC34A3Q8N130 599 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 OR2T11Q8NH01 316 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 VANGL1Q8TAA9 524 aaPredicted RBP6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 ZNF419Q96HQ0 510 aaPredicted RBP6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 CD244Q9BZW8 370 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 NDEL1Q9GZM8 345 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 CAPN10Q9HC96 672 aa6.7□□□□□ -1.34
SYNPO2-206ENST00000610556 DUS2Q9NX74 493 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms