RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 FRG1Q14331 258 aaKnown RBP27.23■■□□□ 1.95
SSBP4-206ENST00000599699 PWWP2BQ6NUJ5 590 aa27.23■■□□□ 1.95
SSBP4-206ENST00000599699 C6orf15Q6UXA7 325 aaPredicted RBP27.23■■□□□ 1.95
SSBP4-206ENST00000599699 SPNS2Q8IVW8 549 aa27.23■■□□□ 1.95
SSBP4-206ENST00000599699 PALM2Q8IXS6 379 aa27.23■■□□□ 1.95
SSBP4-206ENST00000599699 CPNE9Q8IYJ1 553 aa27.23■■□□□ 1.95
SSBP4-206ENST00000599699 ESX1Q8N693 406 aa27.23■■□□□ 1.95
SSBP4-206ENST00000599699 C19orf47Q8N9M1 422 aaKnown RBP27.23■■□□□ 1.95
SSBP4-206ENST00000599699 GALNT6Q8NCL4 622 aa27.23■■□□□ 1.95
SSBP4-206ENST00000599699 SLC22A18Q96BI1 424 aa27.23■■□□□ 1.95
SSBP4-206ENST00000599699 MENTQ9BUN1 341 aa27.23■■□□□ 1.95
SSBP4-206ENST00000599699 TAS2R13Q9NYV9 303 aa27.23■■□□□ 1.95
SSBP4-206ENST00000599699 ZFYVE26Q68DK2 2539 aa27.22■■□□□ 1.95
SSBP4-206ENST00000599699 KRT87PA6NCN2 255 aa27.22■■□□□ 1.95
SSBP4-206ENST00000599699 K7ENP7 123 aa27.22■■□□□ 1.95
SSBP4-206ENST00000599699 EIF3HO15372 352 aaKnown RBP eCLIP27.22■■□□□ 1.95
SSBP4-206ENST00000599699 EFSO43281 561 aa27.22■■□□□ 1.95
SSBP4-206ENST00000599699 TIAF1O95411 115 aa27.22■■□□□ 1.95
SSBP4-206ENST00000599699 MCM3P25205 808 aa27.22■■□□□ 1.95
SSBP4-206ENST00000599699 PEBP1P30086 187 aaKnown RBP27.22■■□□□ 1.95
SSBP4-206ENST00000599699 SLC5A12Q1EHB4 618 aa27.22■■□□□ 1.95
SSBP4-206ENST00000599699 RBM20Q5T481 1227 aaKnown RBP27.22■■□□□ 1.95
SSBP4-206ENST00000599699 INO80CQ6PI98 192 aaPredicted RBP27.22■■□□□ 1.95
SSBP4-206ENST00000599699 NEK10Q6ZWH5 1172 aa27.22■■□□□ 1.95
SSBP4-206ENST00000599699 GALNT7Q86SF2 657 aa27.22■■□□□ 1.95
SSBP4-206ENST00000599699 CCDC25Q86WR0 208 aa27.22■■□□□ 1.95
SSBP4-206ENST00000599699 GPATCH11Q8N954 259 aa27.22■■□□□ 1.95
SSBP4-206ENST00000599699 ZSCAN1Q8NBB4 408 aa27.22■■□□□ 1.95
SSBP4-206ENST00000599699 MNS1Q8NEH6 495 aa27.22■■□□□ 1.95
SSBP4-206ENST00000599699 OR8K5Q8NH50 307 aa27.22■■□□□ 1.95
SSBP4-206ENST00000599699 N4BP2L2Q92802 583 aaPredicted RBP27.22■■□□□ 1.95
SSBP4-206ENST00000599699 KIAA1143Q96AT1 154 aaPredicted RBP27.22■■□□□ 1.95
SSBP4-206ENST00000599699 ZNF501Q96CX3 271 aaPredicted RBP27.22■■□□□ 1.95
SSBP4-206ENST00000599699 FCRL4Q96PJ5 515 aa27.22■■□□□ 1.95
SSBP4-206ENST00000599699 CAMSAP3Q9P1Y5 1249 aaPredicted RBP27.22■■□□□ 1.95
SSBP4-206ENST00000599699 ARHGEF33A8MVX0 844 aa27.21■■□□□ 1.95
SSBP4-206ENST00000599699 TMEM150CB9EJG8 249 aa27.21■■□□□ 1.95
SSBP4-206ENST00000599699 PSIP1O75475 530 aaKnown RBP27.21■■□□□ 1.95
SSBP4-206ENST00000599699 MPC1LP0DKB6 136 aa27.21■■□□□ 1.95
SSBP4-206ENST00000599699 CBSLP0DN79 551 aa27.21■■□□□ 1.95
SSBP4-206ENST00000599699 CBSP35520 551 aa27.21■■□□□ 1.95
SSBP4-206ENST00000599699 SKIV2L2P42285 1042 aaKnown RBP27.21■■□□□ 1.95
SSBP4-206ENST00000599699 TMEM126BQ8IUX1 230 aa27.21■■□□□ 1.95
SSBP4-206ENST00000599699 FLVCR1-AS1Q8TAF5 88 aa27.21■■□□□ 1.95
SSBP4-206ENST00000599699 TCTN2Q96GX1 697 aa27.21■■□□□ 1.95
SSBP4-206ENST00000599699 LRRC1Q9BTT6 524 aa27.21■■□□□ 1.95
SSBP4-206ENST00000599699 SYTL2Q9HCH5 934 aa27.21■■□□□ 1.95
SSBP4-206ENST00000599699 LIFP15018 202 aa27.2■■□□□ 1.94
SSBP4-206ENST00000599699 CDKN2DP55273 166 aa27.2■■□□□ 1.94
SSBP4-206ENST00000599699 CBLBQ13191 982 aa27.2■■□□□ 1.94
SSBP4-206ENST00000599699 MAP7Q14244 749 aa27.2■■□□□ 1.94
SSBP4-206ENST00000599699 TRADDQ15628 312 aa27.2■■□□□ 1.94
SSBP4-206ENST00000599699 SF1Q15637 639 aaKnown RBP27.2■■□□□ 1.94
SSBP4-206ENST00000599699 FAM20CQ8IXL6 584 aa27.2■■□□□ 1.94
SSBP4-206ENST00000599699 OR9A1PQ8NGU1 263 aa27.2■■□□□ 1.94
SSBP4-206ENST00000599699 KIF18AQ8NI77 898 aa27.2■■□□□ 1.94
SSBP4-206ENST00000599699 FBXO25Q8TCJ0 367 aa27.2■■□□□ 1.94
SSBP4-206ENST00000599699 GPN2Q9H9Y4 310 aaPredicted RBP27.2■■□□□ 1.94
SSBP4-206ENST00000599699 SPATA7Q9P0W8 599 aa27.2■■□□□ 1.94
SSBP4-206ENST00000599699 SCRG1O75711 98 aa27.19■■□□□ 1.94
SSBP4-206ENST00000599699 NTRK1P04629 796 aa27.19■■□□□ 1.94
SSBP4-206ENST00000599699 CCNYL3P0C7X3 344 aa27.19■■□□□ 1.94
SSBP4-206ENST00000599699 RGS4P49798 205 aa27.19■■□□□ 1.94
SSBP4-206ENST00000599699 ABHD18Q0P651 414 aa27.19■■□□□ 1.94
SSBP4-206ENST00000599699 EEF1AKMT2Q5JPI9 291 aaKnown RBP27.19■■□□□ 1.94
SSBP4-206ENST00000599699 CDHR3Q6ZTQ4 885 aa27.19■■□□□ 1.94
SSBP4-206ENST00000599699 PIWIL4Q7Z3Z4 852 aaKnown RBP27.19■■□□□ 1.94
SSBP4-206ENST00000599699 TWSG1Q9GZX9 223 aa27.19■■□□□ 1.94
SSBP4-206ENST00000599699 MOCS1Q9NZB8 636 aa27.19■■□□□ 1.94
SSBP4-206ENST00000599699 SERTAD3Q9UJW9 196 aa27.19■■□□□ 1.94
SSBP4-206ENST00000599699 CORO1CQ9ULV4 474 aaPredicted RBP27.19■■□□□ 1.94
SSBP4-206ENST00000599699 LOC101059948A0A1B0GTJ6 334 aa27.18■■□□□ 1.94
SSBP4-206ENST00000599699 ESYT3A0FGR9 886 aa27.18■■□□□ 1.94
SSBP4-206ENST00000599699 SYF2O95926 243 aaKnown RBP27.18■■□□□ 1.94
SSBP4-206ENST00000599699 MT-ND3P03897 115 aa27.18■■□□□ 1.94
SSBP4-206ENST00000599699 PDAP1Q13442 181 aaKnown RBP27.18■■□□□ 1.94
SSBP4-206ENST00000599699 ZIC1Q15915 447 aa27.18■■□□□ 1.94
SSBP4-206ENST00000599699 HECTD2Q5U5R9 776 aa27.18■■□□□ 1.94
SSBP4-206ENST00000599699 LRRC8EQ6NSJ5 796 aa27.18■■□□□ 1.94
SSBP4-206ENST00000599699 STRA8Q7Z7C7 330 aa27.18■■□□□ 1.94
SSBP4-206ENST00000599699 OR1L3Q8NH93 324 aa27.18■■□□□ 1.94
SSBP4-206ENST00000599699 DENND1AQ8TEH3 1009 aa27.18■■□□□ 1.94
SSBP4-206ENST00000599699 EEF1AKMT1Q8WVE0 214 aa27.18■■□□□ 1.94
SSBP4-206ENST00000599699 ASB11Q8WXH4 323 aa27.18■■□□□ 1.94
SSBP4-206ENST00000599699 FAM60AQ9NP50 221 aa27.18■■□□□ 1.94
SSBP4-206ENST00000599699 KLHL20Q9Y2M5 609 aa27.18■■□□□ 1.94
SSBP4-206ENST00000599699 PCDHGA4Q9Y5G9 962 aa27.18■■□□□ 1.94
SSBP4-206ENST00000599699 FAM208BQ5VWN6 2430 aa27.18■■□□□ 1.94
SSBP4-206ENST00000599699 CTAGE15A4D2H0 777 aa27.17■■□□□ 1.94
SSBP4-206ENST00000599699 EIF3FO00303 357 aaPredicted RBP27.17■■□□□ 1.94
SSBP4-206ENST00000599699 ZBTB14O43829 449 aa27.17■■□□□ 1.94
SSBP4-206ENST00000599699 CTAGE8P0CG41 777 aa27.17■■□□□ 1.94
SSBP4-206ENST00000599699 WT1P19544 449 aaPredicted RBP27.17■■□□□ 1.94
SSBP4-206ENST00000599699 CYP2A7P20853 494 aa27.17■■□□□ 1.94
SSBP4-206ENST00000599699 MAGP20916 626 aa27.17■■□□□ 1.94
SSBP4-206ENST00000599699 OAS2P29728 719 aaKnown RBP27.17■■□□□ 1.94
SSBP4-206ENST00000599699 SSTR1P30872 391 aa27.17■■□□□ 1.94
SSBP4-206ENST00000599699 STAT5AP42229 794 aa27.17■■□□□ 1.94
SSBP4-206ENST00000599699 TIAL1Q01085 375 aaKnown RBP eCLIP27.17■■□□□ 1.94
SSBP4-206ENST00000599699 GUCY2DQ02846 1103 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms