RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 ENAMQ9NRM1 1142 aa17.27■□□□□ 0.36
CHMP2A-203ENST00000597209 SLC39A10Q9ULF5 831 aa17.27■□□□□ 0.36
CHMP2A-203ENST00000597209 SRPK3Q9UPE1 567 aa17.27■□□□□ 0.36
CHMP2A-203ENST00000597209 VPS9D1Q9Y2B5 631 aa17.27■□□□□ 0.36
CHMP2A-203ENST00000597209 SPTBP11277 2137 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 SDR42E2A6NKP2 422 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 C9J4A7 227 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 PYCARD-AS1I3L0S3 204 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 PGRMC1O00264 195 aaKnown RBP17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 CES2O00748 559 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 ZSCAN12O43309 604 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 PRICKLE3O43900 615 aaPredicted RBP17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 TMEM63AO94886 807 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 C1orf105O95561 183 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 CD63P08962 238 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 FMO4P31512 558 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 TLE1Q04724 770 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 KLRB1Q12918 225 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 PTCHD3Q3KNS1 767 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 MAGEC3Q8TD91 643 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 ACTRT1Q8TDG2 376 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 FOPNLQ96NB1 174 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 GBP5Q96PP8 586 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 TRIM4Q9C037 500 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 INTS7Q9NVH2 962 aaKnown RBP17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 INTS10Q9NVR2 710 aaKnown RBP17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 SAMD15Q9P1V8 674 aa17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 PCDHGA9Q9Y5G4 932 aaKnown RBP17.26■□□□□ 0.35
CHMP2A-203ENST00000597209 GOLGA8KD6RF30 607 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 GOLGA8TH3BQL2 631 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 ZSCAN9O15535 394 aaPredicted RBP17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 MATN4O95460 622 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 MAGP20916 626 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 KCTD19Q17RG1 926 aaPredicted RBP17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 DEFB110Q30KQ9 67 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 ANKRD20A4Q4UJ75 823 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 NEPROQ6NW34 567 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 CENPUQ71F23 418 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 CILP2Q8IUL8 1156 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 SLC35F6Q8N357 371 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 RAB42Q8N4Z0 105 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 GRK7Q8WTQ7 553 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 ZUFSPQ96AP4 578 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 IL17FQ96PD4 163 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 OSBPL9Q96SU4 736 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 TRIM55Q9BYV6 548 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 ING2Q9H160 280 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 EPN3Q9H201 632 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 GRPEL1Q9HAV7 217 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 MLXIPLQ9NP71 852 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 EURLQ9NYK6 297 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 PADI2Q9Y2J8 665 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 KLK4Q9Y5K2 254 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 NFS1Q9Y697 457 aa17.25■□□□□ 0.35
CHMP2A-203ENST00000597209 TARM1B6A8C7 271 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 K7EM74 188 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 PHF2O75151 1096 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 KLF7O75840 302 aaPredicted RBP17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 CBSLP0DN79 551 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 PKMP14618 531 aaKnown RBP17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 CBSP35520 551 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 MAGEA3P43357 314 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 GCGRP47871 477 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 FNTAP49354 379 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 TERF1P54274 439 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 DCDP81605 110 aaKnown RBP17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 DHX34Q14147 1143 aaKnown RBP17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 ZC3H12BQ5HYM0 836 aaKnown RBP17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 CASC4Q6P4E1 433 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 ASB18Q6ZVZ8 466 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 MCATQ8IVS2 390 aaKnown RBP17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 LMNTD2Q8IXW0 634 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 ZNF655Q8N720 491 aaPredicted RBP17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 LMNTD1Q8N9Z9 388 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 DENND1AQ8TEH3 1009 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 COG1Q8WTW3 980 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 SERPINB12Q96P63 405 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 ACSS2Q9NR19 701 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 SPATA7Q9P0W8 599 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 KLHL42Q9P2K6 505 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 CRYL1Q9Y2S2 319 aa17.24■□□□□ 0.35
CHMP2A-203ENST00000597209 SNRNP200O75643 2136 aaKnown RBP17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 ZCWPW2A0A1B0GU75 182 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 ARGFXA6NJG6 315 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 NIPSNAP2O75323 286 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 CEACAM4O75871 244 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 DNAJB5O75953 348 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 CTSBP07858 339 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 CHRM3P20309 590 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 NR1D1P20393 614 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 PTGIRP43119 386 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 ARSFP54793 590 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 SSPNQ14714 243 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 SF1Q15637 639 aaKnown RBP17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 PAPD7Q5XG87 772 aaKnown RBP17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 CPZQ66K79 652 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 FCRL6Q6DN72 434 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 FIGLAQ6QHK4 219 aa17.23■□□□□ 0.35
CHMP2A-203ENST00000597209 MED25Q71SY5 747 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms