RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SLC5A10A0PJK1 596 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 GOLGA8OA6NCC3 632 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 TRPC5OSA6NMA1 111 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 ZNF839A8K0R7 811 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 LMO7DNF2Z398 122 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 GOLGA8NF8WBI6 632 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 H3BM21 787 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 GFYI3L273 518 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 TRIM38O00635 465 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 YKT6O15498 198 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 FFAR2O15552 330 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 KATNA1O75449 491 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 MATN4O95460 622 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 PROS1P07225 676 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 RPS17P08708 135 aaKnown RBP12.31□□□□□ -0.44
VMP1-202ENST00000585847 MTHFD2P13995 350 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 MAP4P27816 1152 aaKnown RBP12.31□□□□□ -0.44
VMP1-202ENST00000585847 PBLDP30039 288 aaPredicted RBP12.31□□□□□ -0.44
VMP1-202ENST00000585847 ARRB1P49407 418 aaPredicted RBP12.31□□□□□ -0.44
VMP1-202ENST00000585847 PGGT1BP53609 377 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 NAGLUP54802 743 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 PKNOX1P55347 436 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 HSPA14Q0VDF9 509 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 NFE2L1Q14494 772 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 ACSBG2Q5FVE4 666 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 ZNF678Q5SXM1 525 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 SBSNQ6UWP8 590 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 NAPRTQ6XQN6 538 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 FAM47EQ6ZV65 393 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 LRRC70Q7Z2Q7 622 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 YTHDF3Q7Z739 585 aaKnown RBP12.31□□□□□ -0.44
VMP1-202ENST00000585847 SLC30A3Q99726 388 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 MECRQ9BV79 373 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 GATA5Q9BWX5 397 aaPredicted RBP12.31□□□□□ -0.44
VMP1-202ENST00000585847 KLC4Q9NSK0 619 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 SCHIP1Q9P0W5 487 aaPredicted RBP12.31□□□□□ -0.44
VMP1-202ENST00000585847 TAAR2Q9P1P5 351 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 TBC1D29Q9UFV1 150 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 RALYQ9UKM9 306 aaKnown RBP12.31□□□□□ -0.44
VMP1-202ENST00000585847 U3KQA8 63 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 COL5A1P20908 1838 aaPredicted RBP12.31□□□□□ -0.44
VMP1-202ENST00000585847 PCNX2A6NKB5 2137 aa12.31□□□□□ -0.44
VMP1-202ENST00000585847 NPEPPSL1A6NEC2 478 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 HGSO14964 777 aaPredicted RBP12.3□□□□□ -0.44
VMP1-202ENST00000585847 PSIP1O75475 530 aaKnown RBP12.3□□□□□ -0.44
VMP1-202ENST00000585847 CTSEP14091 401 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 ITGB6P18564 788 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 GGT5P36269 586 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 RPL14P50914 215 aaKnown RBP12.3□□□□□ -0.44
VMP1-202ENST00000585847 ATXN3P54252 364 aaPredicted RBP12.3□□□□□ -0.44
VMP1-202ENST00000585847 FOXC1Q12948 553 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 BOP1Q14137 746 aaKnown RBP12.3□□□□□ -0.44
VMP1-202ENST00000585847 OR4D1Q15615 310 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 TBCCQ15814 346 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 DEFB133Q30KQ1 61 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 SH2D4BQ5SQS7 431 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 C10orf62Q5T681 223 aaPredicted RBP12.3□□□□□ -0.44
VMP1-202ENST00000585847 METTL21CQ5VZV1 264 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 OGFOD3Q6PK18 319 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 SLC30A9Q6PML9 568 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 UNQ6494/PRO21346Q6UXR6 183 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 C17orf82Q86X59 251 aaPredicted RBP12.3□□□□□ -0.44
VMP1-202ENST00000585847 KLHDC8AQ8IYD2 350 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 RAB42Q8N4Z0 105 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 PTGR2Q8N8N7 351 aaPredicted RBP12.3□□□□□ -0.44
VMP1-202ENST00000585847 BAHD1Q8TBE0 780 aaPredicted RBP12.3□□□□□ -0.44
VMP1-202ENST00000585847 PATE1Q8WXA2 126 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 SEC16BQ96JE7 1060 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 CCDC138Q96M89 665 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 GSDMCQ9BYG8 508 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 C12orf65Q9H3J6 166 aaKnown RBP12.3□□□□□ -0.44
VMP1-202ENST00000585847 COG4Q9H9E3 785 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 SLCO1B3Q9NPD5 702 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 PRDM8Q9NQV8 689 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 CD274Q9NZQ7 290 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 CDYLQ9Y232 598 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 DNAJC16Q9Y2G8 782 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 WDR37Q9Y2I8 494 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 FRYQ5TBA9 3013 aa12.3□□□□□ -0.44
VMP1-202ENST00000585847 CACNA1GO43497 2377 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 CDC7O00311 574 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 IFRD1O00458 451 aaPredicted RBP12.29□□□□□ -0.44
VMP1-202ENST00000585847 HDAC3O15379 428 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 NOBOXO60393 691 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 CBFA2T3O75081 653 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 VPS4BO75351 444 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 CHEK2O96017 543 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 FGF4P08620 206 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 MYF5P13349 255 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 CCND1P24385 295 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 PDHA2P29803 388 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 ACTR1BP42025 376 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 ACTR1AP61163 376 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 ZNF33BQ06732 778 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 SLC14A1Q13336 389 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 ARHGAP19Q14CB8 494 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 ELOCQ15369 112 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 ZSCAN26Q16670 478 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 PFKFB4Q16877 469 aa12.29□□□□□ -0.44
VMP1-202ENST00000585847 METRNLQ641Q3 311 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms