RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 CHRNGP07510 517 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 FGF4P08620 206 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 XRCC1P18887 633 aaPredicted RBP13.03□□□□□ -0.32
SRSF1-202ENST00000578430 ARRB2P32121 409 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 RPL14P50914 215 aaKnown RBP13.03□□□□□ -0.32
SRSF1-202ENST00000578430 PNLIPRP1P54315 467 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 GRB7Q14451 532 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 CYP2A13Q16696 494 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 DUOXA1Q1HG43 343 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 PTCHD3Q3KNS1 767 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 CCSMST1Q4G0I0 132 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 ZNF542PQ5EBM4 170 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 GKAP1Q5VSY0 366 aaPredicted RBP13.03□□□□□ -0.32
SRSF1-202ENST00000578430 CAPN13Q6MZZ7 669 aaPredicted RBP13.03□□□□□ -0.32
SRSF1-202ENST00000578430 LAYNQ6UX15 382 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 ASCL5Q7RTU5 278 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 GOLGA7Q7Z5G4 137 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 PIGWQ7Z7B1 504 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 CUZD1Q86UP6 607 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 SYTL1Q8IYJ3 562 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 TEX9Q8N6V9 391 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 HMGCLL1Q8TB92 370 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 TRPC4APQ8TEL6 797 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 SETD7Q8WTS6 366 aaKnown RBP13.03□□□□□ -0.32
SRSF1-202ENST00000578430 ZNF480Q8WV37 535 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 STON2Q8WXE9 905 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 CXorf40BQ96DE9 158 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 CAMK1GQ96NX5 476 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 FAM107BQ9H098 131 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 PCBD2Q9H0N5 130 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 ZNF395Q9H8N7 513 aaPredicted RBP13.03□□□□□ -0.32
SRSF1-202ENST00000578430 PLSCR2Q9NRY7 297 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 POT1Q9NUX5 634 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 DNAJC11Q9NVH1 559 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 GPRC5BQ9NZH0 403 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 KLHL14Q9P2G3 628 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 CSNK1G3Q9Y6M4 447 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 SPAG17Q6Q759 2223 aa13.03□□□□□ -0.32
SRSF1-202ENST00000578430 ANKRD12Q6UB98 2062 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 OR52A4PA6NMU1 304 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 LMO7DNF2Z398 122 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 YKT6O15498 198 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 AQP9O43315 295 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 SNX3O60493 162 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 WDR47O94967 919 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 ESRRBO95718 433 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 ALOX15P16050 662 aaPredicted RBP13.02□□□□□ -0.33
SRSF1-202ENST00000578430 ARRB1P49407 418 aaPredicted RBP13.02□□□□□ -0.33
SRSF1-202ENST00000578430 RAB28P51157 221 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 CDH13P55290 713 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 PCDH1Q08174 1060 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 CDC16Q13042 620 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 NAE1Q13564 534 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 RBBP7Q16576 425 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 ZC3H14Q6PJT7 736 aaKnown RBP13.02□□□□□ -0.33
SRSF1-202ENST00000578430 EFL1Q7Z2Z2 1120 aaKnown RBP13.02□□□□□ -0.33
SRSF1-202ENST00000578430 SPATA21Q7Z572 469 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 TRIM48Q8IWZ4 208 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 CLYBLQ8N0X4 340 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 LMX1AQ8TE12 382 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 AGAP11Q8TF27 550 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 ZNF473Q8WTR7 871 aaKnown RBP13.02□□□□□ -0.33
SRSF1-202ENST00000578430 SMPDL3AQ92484 453 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 PIGKQ92643 395 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 NSUN5Q96P11 429 aaKnown RBP13.02□□□□□ -0.33
SRSF1-202ENST00000578430 MIPEPQ99797 713 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 ELAC2Q9BQ52 826 aaKnown RBP13.02□□□□□ -0.33
SRSF1-202ENST00000578430 PLCD4Q9BRC7 762 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 NTMT1Q9BV86 223 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 SGPP1Q9BX95 441 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 STN1Q9H668 368 aaKnown RBP13.02□□□□□ -0.33
SRSF1-202ENST00000578430 NOL11Q9H8H0 719 aaKnown RBP13.02□□□□□ -0.33
SRSF1-202ENST00000578430 IPPKQ9H8X2 491 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 ZBTB26Q9HCK0 441 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 MID1IP1Q9NPA3 183 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 PFDN4Q9NQP4 134 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 SCHIP1Q9P0W5 487 aaPredicted RBP13.02□□□□□ -0.33
SRSF1-202ENST00000578430 DOLKQ9UPQ8 538 aa13.02□□□□□ -0.33
SRSF1-202ENST00000578430 TDRKHQ9Y2W6 561 aaKnown RBP13.02□□□□□ -0.33
SRSF1-202ENST00000578430 CFAP20Q9Y6A4 193 aaKnown RBP13.02□□□□□ -0.33
SRSF1-202ENST00000578430 E7ENX8 843 aa13.01□□□□□ -0.33
SRSF1-202ENST00000578430 MATN2O00339 956 aa13.01□□□□□ -0.33
SRSF1-202ENST00000578430 UBFD1O14562 309 aaKnown RBP13.01□□□□□ -0.33
SRSF1-202ENST00000578430 HDAC3O15379 428 aa13.01□□□□□ -0.33
SRSF1-202ENST00000578430 UGDHO60701 494 aa13.01□□□□□ -0.33
SRSF1-202ENST00000578430 PIAS2O75928 621 aa13.01□□□□□ -0.33
SRSF1-202ENST00000578430 EML2O95834 649 aa13.01□□□□□ -0.33
SRSF1-202ENST00000578430 ENO1P06733 434 aaKnown RBP13.01□□□□□ -0.33
SRSF1-202ENST00000578430 ANXA6P08133 673 aa13.01□□□□□ -0.33
SRSF1-202ENST00000578430 EBLN1P0CF75 366 aa13.01□□□□□ -0.33
SRSF1-202ENST00000578430 MPSTP25325 297 aa13.01□□□□□ -0.33
SRSF1-202ENST00000578430 PKLRP30613 574 aa13.01□□□□□ -0.33
SRSF1-202ENST00000578430 SHMT2P34897 504 aa13.01□□□□□ -0.33
SRSF1-202ENST00000578430 SLC19A1P41440 591 aa13.01□□□□□ -0.33
SRSF1-202ENST00000578430 GDF5P43026 501 aa13.01□□□□□ -0.33
SRSF1-202ENST00000578430 CCNG1P51959 295 aa13.01□□□□□ -0.33
SRSF1-202ENST00000578430 UBE2IP63279 158 aaKnown RBP13.01□□□□□ -0.33
SRSF1-202ENST00000578430 SH3BP2P78314 561 aa13.01□□□□□ -0.33
SRSF1-202ENST00000578430 TAP2Q03519 686 aa13.01□□□□□ -0.33
SRSF1-202ENST00000578430 PRKG2Q13237 762 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms